Pairwise Alignments

Query, 1010 a.a., multidrug efflux membrane fusion protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1051 a.a., acriflavin resistance protein (RefSeq) from Shewanella sp. ANA-3

 Score =  683 bits (1762), Expect = 0.0
 Identities = 384/1018 (37%), Positives = 616/1018 (60%), Gaps = 26/1018 (2%)

Query: 1    MNISELSIRRPVLATVLTIIILLFGFIGYSYLGVREYPSVDNPIISVSCSYPGANADVIE 60
            M +S++S++RPV+A VL++++ +FG + ++ L VRE P V++P+++VS SY GA+A ++E
Sbjct: 1    MWLSDVSVKRPVVAIVLSLLLCVFGLVSFTKLSVREMPDVESPVVTVSTSYSGASAAIME 60

Query: 61   NQITEPLEQNINGIPGIRSLSSVSQQGQSRITVEFELSVDLETAANDVRDKVSRAQRYLP 120
            +QIT+ LE  + GI GI  ++S ++ G SRITV+F L  +L    +DVRD V+RAQR LP
Sbjct: 61   SQITKTLEDELTGISGIDEITSTTRNGSSRITVKFLLGWNLTEGVSDVRDAVARAQRRLP 120

Query: 121  RDCDPPTVSKADADAMPILMVALQSDKRSLLELSEIADLTVKEQLQTISDVSSVSIWGEK 180
             D + P VSK +    P + V L S      +L++ A   ++++   IS VSS+SI G  
Sbjct: 121  EDANDPVVSKDNGSGEPSVYVNLSSSVMDRTQLTDYAQRVLEDRFSLISGVSSISISGGL 180

Query: 181  RYSMRLWLDPVKMAGYGITPIDVKNAVDNENVELPSGSIEGNTTELTIRTLGLMHTADEF 240
               M + L P +MAG  +T  D+ NA+  ENVE P G +  +TT +++RT  L +T  +F
Sbjct: 181  YKVMYVKLRPEQMAGRNVTVTDIINALRKENVETPGGQVRNDTTVMSVRTKRLYYTPKDF 240

Query: 241  NNLIVKEDNNRI-VRFSDIGRAELGPADIKSYMKMNGVPMVGVVVIPQPGANHIEIADAV 299
            + L+V+  ++   +   D+    +G  +  S  K +G+  + + VI Q  AN + +A  V
Sbjct: 241  DYLVVRTASDGTPIYLKDVADVAVGAQNENSTFKSDGIVNLSLGVITQSDANPLIVAQEV 300

Query: 300  YKRMEQMKKDLPEDVTYSYGFDNTKFIRASINEVKETVYVAFILVIIIIFLFLRDWRVTL 359
            +K +++++  LPE  +    FD+T FI  SINEV  T+YV   LV++++++F+   R TL
Sbjct: 301  HKEVDRIQDFLPEGTSLVVDFDSTVFIDRSINEVYNTLYVTGALVVLVLYIFIGQARATL 360

Query: 360  VPCIVIPVSLIGAFFVMYLAGFSINVLSMLAIVLAVGLVVDDAIVMTENIYIRIEKGMSP 419
            +P + +PVSLI AF    + G+SIN+L+++A++LA+GLVVDDAIV+ ENI+  IE+G  P
Sbjct: 361  IPAVTVPVSLISAFIAANMFGYSINLLTLMALILAIGLVVDDAIVVVENIFHHIERGEEP 420

Query: 420  KEAGIEGAKEIFFAVISTTITLVAVFFPIVFMQGMTGRLFREFSIVISGSVIISSFAALT 479
              A  +G +E+ FAV++TT  LV VF PI FM+GM G LF EFS++++ SV+ SS  ALT
Sbjct: 421  LLAAYKGTREVGFAVVATTAVLVMVFLPISFMEGMVGLLFTEFSVMLAVSVLFSSLIALT 480

Query: 480  FTPMLATKLLIKREKQNWFYTKTEPFFEGMNRWYSRSLAAFLRKRWLALPFTFITICLIG 539
             TP+L++KLL    K N F    +  F  M + Y   +   +R +WLA P   +  C+ G
Sbjct: 481  LTPVLSSKLLKANVKPNRFNRFVDSGFARMEKVYRVGVTQAIRFKWLA-PLVILA-CVGG 538

Query: 540  FLW--NAIPAEMAPLEDRSQISINTRGAEGVTYEYIRDYTEDINQLVDSILP-------- 589
              W    +P+++AP EDR  +    +GAEG +Y  +   T +++ + D ++P        
Sbjct: 539  SAWLMQQVPSQLAPQEDRGVLFAFVKGAEGTSYNRM---TANMDIVEDRLMPLLGQGVLR 595

Query: 590  ----DAEAVTARVSSGSGNVRITLKDMKDRDYTQMEVAEKISKAVQK--KTMARSFVQQQ 643
                 A A   R    +G V + L+D + R  T  +    IS A++     M R  +   
Sbjct: 596  SFSVQAPAFGGRAGDQTGFVIMQLEDWEHRHVTAQQALGIISNALKDIPDVMVRPMMP-- 653

Query: 644  SSFGGRRGSMPVQYVLQATNLEKLQEVLPQFMAKVYENPVFQMADVDLKFSKPEARIRIN 703
              F G+  S PVQ+VL  ++  +L +       +   +P+ + AD+D   + PE  + ++
Sbjct: 654  -GFRGQ-SSEPVQFVLGGSDYAELFKWAQVLKEEANASPMMEGADLDYAETTPELIVTVD 711

Query: 704  RDKASVMGVSTKNIAQTLQYGLSGQRMGYFYMNGKQYEILGEINRQQRNKPADLKAIYIR 763
            +++A+ +G+S   ++QTL+  L G++   +   G++Y++    +    N   DL  IY+R
Sbjct: 712  KERAAELGISVDEVSQTLEVMLGGRKETTYVDRGEEYDVYLRGDENSFNNVGDLSQIYMR 771

Query: 764  SSNGDMIQLDNLIELENGIAPPKLYRYNRFVSATISAGLADGKTIGQGLDEMDKIAKETL 823
            S+ G+++ LD L  +E   +  KL   N+  S T+ A ++ G T+G+ L  +D  A E L
Sbjct: 772  SAKGELVTLDTLTHIEEVASAQKLSHTNKQKSITLKANISKGYTLGEALKFLDNKAIELL 831

Query: 824  DDTFRTALSGDSKEYRESSSSLMFAFILAILLIYLILAAQFESFKDPLIIMLTVPLAIAG 883
                    +G+SK+++E+ SS++  F LA+L+ YL+LAAQFESF +PL++M TVP+ + G
Sbjct: 832  PKDISIGYTGESKDFKENQSSILIVFGLALLVAYLVLAAQFESFINPLVVMFTVPMGVFG 891

Query: 884  ALVFMYFGDITMNIFSQIGIIMLIGLVAKNGILIVEFANQKQEAGEDKMSAIKDAALQRL 943
              + +      +NI+SQIG+IMLIG+V KNGILIVEFANQ ++ G     AI DA+ +RL
Sbjct: 892  GFLGLLVTSQGINIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGLALDKAIIDASTRRL 951

Query: 944  RPILMTSASTVLGLIPLAFASGEGANQRIAMGTAVVGGMVVSTLLTMYIVPAIYSYIS 1001
            RPILMT+ +T++G +PL F+SG G+  RIA+GT V  GM  +T +T++++PA+Y  IS
Sbjct: 952  RPILMTAFTTLVGAVPLIFSSGAGSESRIAVGTVVFFGMAFATFVTLFVIPAMYRLIS 1009