Pairwise Alignments

Query, 718 a.a., elongation factor G (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 682 a.a., elongation factor G (RefSeq) from Shewanella amazonensis SB2B

 Score =  371 bits (953), Expect = e-107
 Identities = 230/726 (31%), Positives = 375/726 (51%), Gaps = 58/726 (7%)

Query: 1   MKVYQTNEIKNIALLGSSGSGKTTLVEAMLFESGVIKRRGSVAAKNTVSDYFPVEQEYGY 60
           M  YQT  I+N ALLG +G+GK++L+EA+L+ + VI +RG V      +D+   E+ + +
Sbjct: 1   MAEYQTARIRNFALLGHTGAGKSSLLEALLYGARVINQRGRVDKGTNHADFTAQEKAHQH 60

Query: 61  SVFSTVLHVEWNNKKLNIIDCPGSDDFVGSTVTALNVTDTAIILLNGQYGVEVGTQNHFR 120
           S+  + L+++++   +N+ID PG  DF G  +  L   ++ ++++N   G+E  T   F 
Sbjct: 61  SLEPSFLNLDFDEHHINLIDTPGLPDFFGRALLPLPAVESVLLVVNAATGIEPVTARAFE 120

Query: 121 YTEKLNKPVIFLVNQLDNEKCDYDNILEQLKEAYGSKVVPIQYPIATGPGFNALIDVLLM 180
                 K V   VN +D        I+E+L+  +G + +P+  P A G   N ++D  L 
Sbjct: 121 AARAQGKVVCICVNHIDGHLDKLPAIIEELQTTFGPRCLPVNLPSADG---NDVVDCYLH 177

Query: 181 KKYSWKPEGGAPVIEDIPAEEMDKAMEMHKALVEAAAENDEGLMEKFFEQ-DSLTEDEMR 239
                         ED       +A      LV+   E DE LM  + EQ + L+ +++ 
Sbjct: 178 -------------CEDTRPTLFSQAASARDELVDTVLEEDEALMTLYLEQGEMLSAEQLH 224

Query: 240 EGIRKGLIARGMFPVFCVCGGKDMGVRRLMEFLGNVVPFVSEMPKVENTDG---KEVAPD 296
           E +   L    + P+       D+G+  L+E +  ++P   E    +   G   K V  D
Sbjct: 225 EPLETALRMGHLVPICFTSAELDIGIASLLEIMVKLMPSPLEANPPQFIKGFGDKAVPVD 284

Query: 297 VN-GPES---LYFFKTSVEPHIGEVSYFKVMSGKVREGDDL-LNADRGSKERIAQIYVVA 351
           V   P+       F+  ++P+ G V+ F++  G +  G  L + ADR    ++A +  + 
Sbjct: 285 VTQSPDDHVLAQVFRVGIDPYFGRVAVFRLYQGTLEAGMRLFIGADR-KPVKVAHLIKLQ 343

Query: 352 GGNRVKVEELQAGDIGAAVKLKDVKTGNTLNGKDCDYKFNF--IKYPNSKYSRAIKPVNE 409
           G    +VE+   GDI A  K+ +++ G+ L+    + +F+   +K P   +  A+ P   
Sbjct: 344 GAETTEVEKAIPGDICALCKIDELEVGSVLHDSHDEDEFHLRELKMPQPIFGLAVSPKRR 403

Query: 410 ADVEKMMTILNRMREEDPTWVIEQSKELKQTLVHGQGEFHLRTLKWRLENNEKLQVKFEE 469
            D +K+  +L ++  EDP+  + Q+    QT++ G G+ HL+    + ++  ++ ++  +
Sbjct: 404 GDEQKIAEVLAKLIAEDPSLAVSQNDAEGQTVLSGLGDLHLQIALEKAQSVFRVDMETCK 463

Query: 470 PKIPYRETITKAARADYRHKKQSGGAGQFGEVHLIVEPYKEGMPVPDTYKFNGQEFKITV 529
           P + YRET+ KAA A YRHKKQSGGAGQFGEV L VEP   G                  
Sbjct: 464 PAVAYRETVCKAATARYRHKKQSGGAGQFGEVELTVEPLPRG------------------ 505

Query: 530 RGTEEIPLEWGGKLVFINSIVGGSIDARFLPAIMKGIMSRLEQGPLTGSYARDVRVIVYD 589
           +G E           F++ +VGG++  +F+PA+ KG+   L+ G L G    DVRV V D
Sbjct: 506 QGFE-----------FVSKVVGGAVPTQFIPAVEKGVREALKVGRLGGYPVEDVRVTVLD 554

Query: 590 GKMHPVDSNEISFMLAGRNAFSEAFKNAGPKILEPIYDVEVFVPSDRMGDVMGDLQGRRA 649
           GK H VDS EI+F++AG+ AF EAF  A P ILEP+  +E+ V ++ +GD+ G L   RA
Sbjct: 555 GKHHSVDSKEIAFVMAGKKAFYEAFLQANPVILEPLVSMEILVSAEDVGDITGHLSSSRA 614

Query: 650 MIMGMSSEK-GFEKLVAKVPLKEMSSYSTALSSLTGGRASFIMKFASYELVPTDVQDKLI 708
           M+ G  + + G  K++A+ PL  +  Y+T L S+T G   F + FA YE+VP  VQ  L+
Sbjct: 615 MVCGTEARRDGKVKVLAEAPLSTVDDYATRLKSMTSGEGEFTLSFARYEVVPPAVQQSLL 674

Query: 709 KDFEAK 714
           +  E K
Sbjct: 675 RTIEDK 680