Pairwise Alignments

Query, 600 a.a., dihydroxy-acid dehydratase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 616 a.a., dihydroxy-acid dehydratase (RefSeq) from Shewanella loihica PV-4

 Score =  737 bits (1902), Expect = 0.0
 Identities = 381/608 (62%), Positives = 456/608 (75%), Gaps = 15/608 (2%)

Query: 4   QLRSSFSTQGRRMAGARALWAANGMKKNQMGKPIIAIVNSFTQFVPGHVHLHEIGQLVKA 63
           +LRS+ STQGR MAGARALW A G+K +  GKPI+AI NSFTQFVPGHVHL ++G LV  
Sbjct: 3   KLRSATSTQGRNMAGARALWRATGVKDSDFGKPIVAIANSFTQFVPGHVHLKDMGSLVAG 62

Query: 64  EIEKLGCFAAEFNTIAIDDGIAMGHDGMLYSLPSRDIIADSVEYMVNAHKADAMVCISNC 123
            IE+ G  A EFNTIA+DDGIAMGH GMLYSLPSR++IADSVEYMVNAH ADA+VCISNC
Sbjct: 63  AIEEAGGIAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADALVCISNC 122

Query: 124 DKITPGMLMAAMRLNIPTVFVSGGPMEAGEWNGQH----LDLIDAMIKSADDSVSDQEVA 179
           DKITPGMLMAA+RLNIP VFVSGGPMEAG+         LDL+DAM+ +ADD VSD++  
Sbjct: 123 DKITPGMLMAALRLNIPVVFVSGGPMEAGKTKLSDKLIKLDLVDAMVAAADDRVSDEDSE 182

Query: 180 NIEQNACPTCGCCSGMFTANSMNCLNEAIGLALPGNGTIVATHENRTKLFEDAAKLIVEN 239
            IE++ACPTCG CSGMFTANSMNCL EA+GL+LPGNG+++ATH +R +LF +A + ++  
Sbjct: 183 KIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSLLATHSDRRELFLEAGRRVMAL 242

Query: 240 AMKYYEEGDESVLPRSIATRQAFLNAMTLDIAMGGSTNTVLHLLAVAHEAGVDFKMDDID 299
           A +YY + DES LPR+IA+ +AF NAM LDIAMGGS+NTVLHLLA A EA VDF M DID
Sbjct: 243 ANRYYRDDDESALPRNIASFKAFENAMALDIAMGGSSNTVLHLLAAAQEAKVDFTMADID 302

Query: 300 MLSRKTPCLCKVAPNTQKYHIQDVNRAGGIIAILAELAKGGLIDTSVLRVDGMSLAEAID 359
            LSR+ P LCKVAP+T KYH++DV+RAGG++ IL EL + GL+ T V  V G +L   + 
Sbjct: 303 RLSRQVPHLCKVAPSTPKYHMEDVHRAGGVMGILGELDRAGLLHTDVSHVAGENLKAVLV 362

Query: 360 QYSITSPNVTEKAMSKYSSAAGNRFNLVLGSQGAYYQELDKDRANGCIRDLEHAYSKDGG 419
           QY +      E     Y++           SQ   +  LD DR  GCIR  E A+S++GG
Sbjct: 363 QYDLVQTQ-DEAVQQFYAAGPAGIPTTKAFSQSCRWPSLDVDRQEGCIRTREFAFSQEGG 421

Query: 420 LAVLKGNIAQDGCVVKTAGVDESIWKFTGPAKVFDSQEAACEGILGGRVVSGDVVVITHE 479
           LAVL GNIA DGC+VKTAGVDE+   F G A+V++SQ+ A  GILGG VV+GDVVVI +E
Sbjct: 422 LAVLSGNIAADGCIVKTAGVDEANHTFVGHARVYESQDDAVAGILGGEVVAGDVVVIRYE 481

Query: 480 GPKGGPGMQEMLYPTSYIKSRHLGKECALITDGRFSGGTSGLSIGHVSPEAAAGGNIGKI 539
           GPKGGPGMQEMLYPTSY+KS+ LG  CALITDGRFSGGTSGLSIGHVSPEAAAGG I  +
Sbjct: 482 GPKGGPGMQEMLYPTSYLKSKGLGTSCALITDGRFSGGTSGLSIGHVSPEAAAGGTIALV 541

Query: 540 VDGDIIEIDIPARTINVRLTDEELAARPMT----------PVTRDRYVPKSLKAYASMVS 589
             GD IEIDIPAR+I + ++DE L  R             PV R+R V  +LKAYA + +
Sbjct: 542 ETGDRIEIDIPARSITLAVSDEVLETRRQAMQARGKQAWKPVNRERSVSLALKAYAMLAT 601

Query: 590 SADKGAVR 597
           SADKGAVR
Sbjct: 602 SADKGAVR 609