Pairwise Alignments

Query, 407 a.a., putative NADH:flavin oxidoreductase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 411 a.a., NADH:flavin oxidoreductase/NADH oxidase family protein from Ralstonia sp. UNC404CL21Col

 Score =  143 bits (360), Expect = 1e-38
 Identities = 109/356 (30%), Positives = 164/356 (46%), Gaps = 35/356 (9%)

Query: 4   KLFTPVTF-GPLTLRNRTIRSAAFESMCPGN-APSQMLLDYHRSVAAGGVGMTTVAYAAV 61
           KLFTP+       + NR  ++A  E+M   + APS  LL  +++ AAGG G+       V
Sbjct: 2   KLFTPLVLPNGAVIPNRLAKAAMEENMADADHAPSDALLRLYQAWAAGGAGLILTGNVMV 61

Query: 62  TQSGLSFDRQLWLRPEI-ISGLREVTGAIHTEGAAAGIQIGHCGNMSHKKICGTT--PIS 118
               ++    + L     +   R    A    GA A +QI H G      +   T  P +
Sbjct: 62  DHRAMTGPNGVVLEDGAHLERFRRWAEAARAHGAHAWVQINHPGRQMPASLGQPTVAPSA 121

Query: 119 ASTGFNLYSPTFV--RGMKREELPEMARAYGRAVHLAREAGFDAVEVHAGHGYLISQFLS 176
                   S  F   R M   ++ ++ + + R+  LA ++GF  V++HA HGYL+SQFLS
Sbjct: 122 VPLALGALSKQFPMPREMTEADIRDVQQRFTRSAQLAEQSGFTGVQIHAAHGYLLSQFLS 181

Query: 177 PYTNHRKDDYGGLLQNRMRFMEMVMNEVMTAAGSDMAVIVKMNMRDGFKGGMETDESLQV 236
           P +N R+D +GG ++NR R +  ++  V  A   +  V VK+N  D  +GG   D++ QV
Sbjct: 182 PISNRRQDQWGGPIENRARLLLDIVRSVRAAVSPEFVVAVKLNSADFQRGGFSPDDAKQV 241

Query: 237 AKRLLALGAHALVLSGGFVSKAPMYVMRGAMPIRSMAYYMDCWWLKYGVRMFGKWMIPTV 296
            + L  LG   + LSGG      M     A   R++A                       
Sbjct: 242 VELLNPLGVDLVELSGGSYEVPAM--QGQARDGRTLA----------------------- 276

Query: 297 PFREAYFLEDALKFRAALPEAPLIYVGGLVSREKIDEVLDAGFDAVQMARALLNEP 352
             REAYFLE A    A +   PL+  GG+  R   ++V+D+G D V +A AL  +P
Sbjct: 277 --REAYFLEFARDI-AGIARMPLMVTGGIRRRAVAEQVVDSGVDMVGIATALSIDP 329