Pairwise Alignments

Query, 1042 a.a., cation efflux system protein, AcrB/AcrD/AcrF family protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1065 a.a., heavy metal efflux pump, CzcA family from Marinobacter adhaerens HP15

 Score =  631 bits (1628), Expect = 0.0
 Identities = 370/1065 (34%), Positives = 606/1065 (56%), Gaps = 44/1065 (4%)

Query: 1    MLNKIIHYSLHNRLVVLCAAILLLIAGTYTAMHTEVDVFPDLNAPTVVIMTEANGMAAEE 60
            M N+++ +++ NRL+VL A  +L+    +      +D FPD+    V + TEA G+AAEE
Sbjct: 1    MFNRVVDWAVQNRLLVLIALAVLIATAAFQIPKLNLDAFPDVTNVQVAVNTEAPGLAAEE 60

Query: 61   VEQLVTFPVETAVNGATGVRRVRSSSTNGFSVVWVEFDWGTDIYLARQIVSEKLAVVSES 120
            VEQL+T+P+E  +     V  VRS S  G S V V F  GTDIY ARQ+V E+L    E 
Sbjct: 61   VEQLITYPIEAVMYALPDVEEVRSISKTGLSGVTVVFKEGTDIYFARQLVFERLQAAREL 120

Query: 121  LPVNVGKPTLGPQSSILGEMLIVGLTADSTS---MLDLRTIADWTIRPRLLSTGGVAQVA 177
            +P  VG P +GP +S LG++    L AD  S    ++LR++ DW ++  L+   GV ++ 
Sbjct: 121  IPDGVGVPEMGPNTSGLGQVYQYLLIADPNSGYDAMELRSLHDWLVKLLLIPAEGVTEIL 180

Query: 178  VLGGDIKEYQIQLDPERMRHYGVSMGEVMAVTQDMNLNANGGVLYEFGNEYIARGV---- 233
              GG++++YQ+ L+P RM  Y +S  +VM   ++ N N  G  +     + + RG+    
Sbjct: 181  SFGGEVRQYQVNLNPARMLSYDLSQNDVMHALENNNSNVGGWYMGRGQEQLVIRGMGWLG 240

Query: 234  LSTPKVEELGKAVVKTVNNFPVTLEDIADVKIGPK----APKLGTASERGK-----PAVL 284
                 +E++ +  VKT +   VT++D+A V +G +    A  +    E G+       V 
Sbjct: 241  NGEQGLEQIRQVPVKTSDGITVTVDDVAQVGLGTEIRQGAVTMTRKDEDGQVEQLGEVVS 300

Query: 285  MTVTKQPATSTLELTDKLEASLQDLQKNLPADVKVSTDIFRQSRFIESSIGNVKKSLFEG 344
              V K+   +T    D +EA ++ + + LP+ V+     + Q+  +  ++  V  +L   
Sbjct: 301  GIVLKRMGANTKATIDGIEARIERINQALPSGVRFEP-YYNQADLVTKAVETVTNALLLA 359

Query: 345  GIFVVIVLFLFLANVRTTLISLVTLPLSLLVSILTLHYMGLTINTMSLGGMAIAIGSLVD 404
             +F+ IVL LFL N+R T + L+++P+S+ ++++ + + GL+ N MSLGG+A+AIG LVD
Sbjct: 360  FVFIAIVLALFLMNLRATTLVLLSIPISIGIALMIMAWFGLSANLMSLGGIAVAIGMLVD 419

Query: 405  DAIVDVENVYKRLRENRQKAEAERFSTLEV-----------------VFNASKEVRMPIL 447
             ++V VEN++K L     + +A R   +E                  +  A +EV  PI 
Sbjct: 420  GSVVMVENMFKHLTHPDAEHDAHRDELIENDPDPLDASHDDHGIALRLQEAGREVARPIF 479

Query: 448  NSTLIIVVSFVPLFFLSGMEGRMLVPLGIAFIVALFASTVVALTLTPVLCSYLLGSNKTN 507
             +T II+V F+PLF   G+E ++  P+ I+ ++A+ ++ +VAL + P L S++    K  
Sbjct: 480  FATAIILVVFMPLFSFEGVEAKLFQPMAISIMLAIVSAVIVALIVVPALASFVF--RKGI 537

Query: 508  KELKESFVARWMKGIYEKALTWVLAHKRVTLGSTIVLFLIALGVFFTLGRSFLPSFNEGS 567
            +E +ESFV + ++ +Y + L W L H R  +G+  VL ++A  V   LG  F+P   EG+
Sbjct: 538  RE-RESFVLKPLEKLYRQGLDWSLKHTRSVVGAAAVLVVLAALVVPRLGTEFVPELEEGT 596

Query: 568  FTINISSLPGISLEESNKMGHRAEELLLTIPEIQTVARKTGRAELDEHALGVNVSEIEAP 627
              + ++  P  SL+ + ++  + E +L+  PE+     + GRAE+      VN  EI   
Sbjct: 597  INLRVTLAPSSSLDTAIEVAPKLEAMLMEFPEVTYALSRAGRAEIGGDPEPVNNIEIYIG 656

Query: 628  FELKDR-----PRSELVAEVREKLGTITGANIEIGQPISHRIDAMLSGTKANIAIKLFGD 682
             +          R EL A   EKL    G      QPI+ R+D +LSG +A +AIKLFG 
Sbjct: 657  LKPTSEWTSASNRYELQALFEEKLEQHPGLLFNFSQPIATRVDELLSGVRAQLAIKLFGP 716

Query: 683  DLNKMFSLGNQIKGAISDIPGIADLNVEQQIERPQLKIQPKREMLAKFGITLPEFSEYVN 742
            DL+ +   G QI+ A+  + G  D+ +EQ     QL +QP R+ L+++G+ + +    V 
Sbjct: 717  DLDVLAEKGQQIEAAVRTVQGTRDVAMEQIAGEAQLVVQPDRQALSRYGLAVSDVMSVVR 776

Query: 743  VALAGKVISQVYEQGKSFDLIVKVKDDARDEMEKIRNLMVDTNDGRKVPLNYVAEVVSSM 802
              L G    Q+    + +D+ V++    R++ + I +L +    G  V L  VA+V    
Sbjct: 777  DGLGGAAAGQIINGNERYDIYVRLAKRFREDRDAIADLRLQAPSGAWVRLGDVADVSIES 836

Query: 803  GPNTINRENVKRKIVISANVADRDLRSVVNDIQKQVDATIQLPEGYHIEYGGQFESEQAA 862
            GP  + R++V+R++VI +NV  RD+ SVV DIQ  + + + LP GY ++ GGQFE++Q A
Sbjct: 837  GPPQVRRDDVQRRVVIQSNVQGRDMGSVVADIQDTIASEVNLPPGYSVDIGGQFENQQRA 896

Query: 863  SRVLALTSFMSIVIIFLLLYHEFRSVKESGVILLNLPLALIGGVFALVITTGEVSIPAII 922
             + LA+   +S+ +I LLLY  F SV ++ +IL+N+PLA+IGGVF+L I+   +S+P+ +
Sbjct: 897  QKRLAIVVPVSLGLIALLLYFAFSSVGQALLILVNVPLAVIGGVFSLWISGQYLSVPSSV 956

Query: 923  GFISLFGIATRNGMLLISHYNHLQQVEGLNVYDSVVQGSLDRLNPILMTALSSALALIPL 982
            GFI+LFG+A  NG++++   N   Q +GL+V  +V +G++ RL P+LMTA++SAL LIP+
Sbjct: 957  GFITLFGVAVLNGVVMVESINQRIQ-DGLSVDAAVFEGAVSRLRPVLMTAITSALGLIPM 1015

Query: 983  ALGGDLPGNEIQSPMAKVILGGLLTSTFLNGFIVPIVYLMMHRQR 1027
             L   + G EIQ P+A VI+GGL+T+TFL  F++P ++    R +
Sbjct: 1016 LLSTGV-GAEIQKPLASVIVGGLVTATFLTLFVLPALFTRFSRAK 1059