Pairwise Alignments

Query, 1042 a.a., cation efflux system protein, AcrB/AcrD/AcrF family protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1035 a.a., heavy metal efflux pump, CzcA family from Marinobacter adhaerens HP15

 Score =  649 bits (1674), Expect = 0.0
 Identities = 356/1041 (34%), Positives = 610/1041 (58%), Gaps = 25/1041 (2%)

Query: 1    MLNKIIHYSLHNRLVVLCAAILLLIAGTYTAMHTEVDVFPDLNAPTVVIMTEANGMAAEE 60
            M+N I++Y+L+NRL+ L  AI +++AG ++     VD FPD     V + T + G++  +
Sbjct: 1    MINAIVNYALNNRLMTLVFAIAVIVAGIFSFQKLPVDAFPDATPTMVQVFTTSPGLSPVD 60

Query: 61   VEQLVTFPVETAVNGATGVRRVRSSSTNGFSVVWVEFDWGTDIYLARQIVSEKLAVVSES 120
            +E L+++PVE ++ G   + +V+S+S  G S V + F+ GTDIY AR++V+E+L+     
Sbjct: 61   IETLISYPVEISMYGIPKLEKVQSTSIFGLSRVTIYFEDGTDIYFARRLVNERLSEAKRQ 120

Query: 121  LPVNVGKPTLGPQSSILGEMLIVGLTADST---SMLDLRTIADWTIRPRLLSTGGVAQVA 177
            +P  +G+P LGP +S LG +L+  L  +     S+ ++RTI DW ++P+L +  GV  V 
Sbjct: 121  IPEGMGEPELGPIASGLGRILMYSLETEDKEQYSLQEIRTIQDWIVKPQLRTVPGVTGVL 180

Query: 178  VLGGDIKEYQIQLDPERMRHYGVSMGEVMAVTQDMNLNANGGVLYEFGNEYIARGV---- 233
             +GG++K+YQ+ +D + ++   +++ ++       N N     +   G EYI RG     
Sbjct: 181  SIGGEVKQYQVNIDAQELQARNLTVSDIRGALTQNNRNVGASFITRGGEEYIVRGYGWVD 240

Query: 234  LSTPKVEELGKAVV-KTVNNFPVTLEDIADVKIGPKAPKLGTASERGKPAVLMTVTKQPA 292
                 +E++   +V K+    P+ ++D+A+V +GP A + G     G+ +V   V K   
Sbjct: 241  SGYEGIEDIQNIIVSKSEGESPIYVKDVAEVGLGP-AIRRGAEVSSGEESVGGYVMKLIG 299

Query: 293  TSTLELTDKLEASLQDLQKNLPADVKVSTDIFRQSRFIESSIGNVKKSLFEGGIFVVIVL 352
            T+T ++ + + A + DL K+LP  +K+    + Q+  +  +IG V+K+L EG + V++ L
Sbjct: 300  TNTSQVLEDVNAKIDDLNKSLPEGLKIEA-YYSQADLVGKAIGTVEKALLEGSVLVLVFL 358

Query: 353  FLFLANVRTTLISLVTLPLSLLVSILTLHYMGLTINTMSLGGMAIAIGSLVDDAIVDVEN 412
            +LFL NVR+TLI + TLPLS+L + + +   GL+ N MSLGG+AI IG +VD A+V +EN
Sbjct: 359  YLFLGNVRSTLIVVATLPLSVLFAFIAMRMSGLSANLMSLGGLAIGIGMMVDGAVVMIEN 418

Query: 413  VYKRLRENRQKAEAERFSTLEVVFNASKEVRMPILNSTLIIVVSFVPLFFLSGMEGRMLV 472
            +++ L E       E+ S L +V  +++EV  PI+ +  II++ F+PLF L G+EG++  
Sbjct: 419  IFRHLEERSD----EKVSVLRLVGESAREVARPIVFAIGIIIIVFLPLFTLQGVEGKLFS 474

Query: 473  PLGIAFIVALFASTVVALTLTPVLCSYLLGSNKTNKELKESFVARWMKGIYEKALTWVLA 532
            P+      AL  + ++ALTL PVL S    S K   + KE  +  ++  +Y+  +  V+ 
Sbjct: 475  PMAYTISFALIGALLLALTLVPVLASL---SFKMGGQHKEPKLVLFLNRLYKPVVNTVVK 531

Query: 533  HKRVTLGSTIVLFLIALGVFFTLGRSFLPSFNEGSFTINISSLPGISLEESNKMGHRAEE 592
              ++ +G  +V F  +L +F  LG  F+P+  EG+F I  +  PG SLE + K G R + 
Sbjct: 532  VPKIVMGVAVVAFAGSLLLFPYLGSEFVPTLREGTFQIRSTLPPGASLESAIKYGKRIQS 591

Query: 593  LLLTIPEIQTVARKTGRAELDEHALGVNVSEIEAPFELKDRPRSE-----LVAEVREKLG 647
            ++   PE+     + GRAE+      VNV       +  D+ R +     L + + E L 
Sbjct: 592  VVDEFPEVTGTYARIGRAEVGGDPEPVNVVATLVNLKPLDQWREDVSYEDLQSRIAEALD 651

Query: 648  T-ITGANIEIGQPISHRIDAMLSGTKANIAIKLFGDDLNKMFSLGNQIKGAISDIPGIAD 706
              + G    + QPI  R D +LSG +A +   +FGDDL+++  +G ++    +D+PG  D
Sbjct: 652  ERVPGLANNLSQPIQLRTDELLSGVQAQLVASIFGDDLDELGRIGREVAALANDVPGATD 711

Query: 707  LNVEQQIERPQLKIQPKREMLAKFGITLPEFSEYVNVALAGKVISQVYEQGKSFDLIVKV 766
            +  +Q   + Q+ I+P RE+LA+FGI++      V   + GK    V++  + F++  ++
Sbjct: 712  VRAQQSAGKKQIVIRPDREVLAQFGISIDNLMSTVETGIGGKSAGLVFDGVRRFEIFARL 771

Query: 767  KDDARDEMEKIRNLMVDTNDGRKVPLNYVAEVVSSMGPNTINRENVKRKIVISANVADRD 826
            ++  R  +++IR L +  N G  +PL+ VA+V    GP  I+R N  R+  +  NV  RD
Sbjct: 772  QESYRGSIDEIRKLPLRGNSGELIPLSRVADVEMYAGPKKISRSNASRRQYVQMNVRGRD 831

Query: 827  LRSVVNDIQKQVDATIQLPEGYHIEYGGQFESEQAASRVLALTSFMSIVIIFLLLYHEFR 886
            + SVV D++ +++  + +P GY +E+GGQFE+++ A   LA+   +++ +IFLLL+  F 
Sbjct: 832  MGSVVQDLRNRIEKQVDMPPGYFVEFGGQFENQERAMARLAIVVPITLALIFLLLFSAFS 891

Query: 887  SVKESGVILLNLPLALIGGVFALVITTGEVSIPAIIGFISLFGIATRNGMLLISHYNHLQ 946
            S++ + +I +N+P A+ GG+ AL +T   +S+PA +GFI++FG+A  NG++++S+ N L+
Sbjct: 892  SLRYAALIFMNVPFAVTGGIVALFVTGLYLSVPAAVGFIAVFGVAVLNGVVMVSYINQLR 951

Query: 947  QVEGLNVYDSVVQGSLDRLNPILMTALSSALALIPLALGGDLPGNEIQSPMAKVILGGLL 1006
              EG  V ++V  G+  RL P+LMTA  + L LIPL L   + G+ +Q P+A V++GGL+
Sbjct: 952  D-EGYEVIEAVKLGAQRRLRPVLMTASVAILGLIPLLLADGI-GSNVQRPLATVVVGGLI 1009

Query: 1007 TSTFLNGFIVPIVYLMMHRQR 1027
            TST L   ++P VY     +R
Sbjct: 1010 TSTLLTLVVLPSVYQWFASER 1030