Pairwise Alignments

Query, 1042 a.a., cation efflux system protein, AcrB/AcrD/AcrF family protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1076 a.a., heavy metal efflux pump, CzcA family from Sphingomonas koreensis DSMZ 15582

 Score =  586 bits (1511), Expect = e-171
 Identities = 342/1067 (32%), Positives = 579/1067 (54%), Gaps = 49/1067 (4%)

Query: 1    MLNKIIHYSLHNRLVVLCAAILLLIAGTYTAMHTEVDVFPDLNAPTVVIMTEANGMAAEE 60
            M+ +I+ +++  R  VL   ++  + G  +     +D  PD+    V I   A  ++ E 
Sbjct: 1    MIERIVTFAVERRWFVLLMTLIATVIGAVSLSRLPIDAVPDITNNQVQINIRAPALSPEL 60

Query: 61   VEQLVTFPVETAVNGATGVRRVRSSSTNGFSVVWVEFDWGTDIYLARQIVSEKLAVVSES 120
            VE+ V FP+ETA+ G  G+   RS S NGF+ V   F   T+IY ARQ V+E+L    ES
Sbjct: 61   VEKQVAFPIETALAGVPGLEHTRSLSRNGFAQVTAVFTDSTNIYFARQQVAERLRTAEES 120

Query: 121  LPVNVGKPTLGPQSSILGEMLI-------------------------------VGLTADS 149
            LP     P +GP ++ LGE+ +                                 L +++
Sbjct: 121  LPAGA-TPEMGPIATGLGEVYMWTVHMAHRPEDKHKPGEPGIQPDGSYLTPEGERLVSEA 179

Query: 150  TSMLDLRTIADWTIRPRLLSTGGVAQVAVLGGDIKEYQIQLDPERMRHYGVSMGEVMAVT 209
                 LRT  DW + P L S  G+A V  +GG +K++Q+  D +R+    +S+G++    
Sbjct: 180  DKATYLRTTQDWIVAPLLKSVPGLAGVDSIGGYVKQFQVVPDVQRLTALKLSLGDLATAL 239

Query: 210  QDMNLNANGGVLYEFGNEYIARGVLSTPKVEELGKAVVKTVNNFPVTLEDIADVKIGPKA 269
            ++ N     G +   G     R        ++LG+ V+ T    P+ L  +A V+ G +A
Sbjct: 240  EENNSAVGAGTVDRNGEGLAVRSDARIANADQLGRTVIATREGVPILLNQVATVRTG-QA 298

Query: 270  PKLGTASERGKPAVLMTVTKQPATSTLELTDKLEASLQDLQKNLPADVKVSTDIFRQSRF 329
             ++G+ASE  +  V+ T   +   ++  +   +   L ++  +LP D+ +   +  ++  
Sbjct: 299  IRMGSASENAQEVVVGTAIMRIGENSRNVASAVATRLDEVNASLPTDIVIQP-VLDRTGL 357

Query: 330  IESSIGNVKKSLFEGGIFVVIVLFLFLANVRTTLISLVTLPLSLLVSILTLHYMGLTINT 389
            + S+I  V K+L EG + V++VLFL L N R  LI+ + +P+++L++   +   G++ N 
Sbjct: 358  VNSTIKTVAKNLSEGALLVIVVLFLLLGNFRAALIAALVIPVTMLMTSFGMLRGGVSANL 417

Query: 390  MSLGGMAIAIGSLVDDAIVDVENVYKRLRENRQKA--EAERFSTLEVVFNASKEVRMPIL 447
            MSLG  A+  G +VD A++ VEN  +R+ E +       ++   L VV  A++E+  P +
Sbjct: 418  MSLG--ALDFGLIVDGAVIIVENALRRIAERQHHIGRTLDKGERLSVVAGAAREMIRPSV 475

Query: 448  NSTLIIVVSFVPLFFLSGMEGRMLVPLGIAFIVALFASTVVALTLTPVLCSYLLGSNKTN 507
                II++ +VPL  L+G+EG+   P+ +  I+AL  + V++LT  P + +  L      
Sbjct: 476  YGQAIIILVYVPLLTLTGVEGKTFTPMALTVILALAFAFVLSLTFVPAMLAIWLSKPV-- 533

Query: 508  KELKESFVARWMKGIYEKALTWVLAHKRVTLGSTIVLFLIALGVFFTLGRSFLPSFNEGS 567
             E KE  +  W+K  YE  L   +A  RVT+ + +  FL+A+  F TLG+ FLP  +EG 
Sbjct: 534  -EEKEGRIMSWLKRRYEPGLDRAMARPRVTILAGVGAFLLAILAFMTLGQEFLPQLDEGD 592

Query: 568  FTINISSLPGISLEESNKMGHRAEELLLTIPEIQTVARKTGRAELDEHALGVNVSEI--- 624
             T+ +  +PG S+E+S  M  + E+ + +IPE++ V  KTG AEL    +  N+S+    
Sbjct: 593  ATVQVLRVPGTSVEQSQAMQFQVEKAISSIPEVKFVFSKTGTAELASDPMPPNISDTFVI 652

Query: 625  ---EAPFELKDRPRSELVAEVREKLGTITGANIEIGQPISHRIDAMLSGTKANIAIKLFG 681
                A +      ++E+VA++ + L  + G   EI QPI  R + +++G + +IA+K+FG
Sbjct: 653  MKKHADWPDPSLTKAEVVAKIEKALEGLPGNAFEISQPIQMRFNELIAGVRGDIAVKVFG 712

Query: 682  DDLNKMFSLGNQIKGAISDIPGIADLNVEQQIERPQLKIQPKREMLAKFGITLPEFSEYV 741
            DD + M    N+I G +  + G  D+ VEQ    P L I+P R+ +A+ GIT     + V
Sbjct: 713  DDTDAMNDTANKIAGILRGVDGATDVRVEQTEGLPMLDIRPNRDAMARLGITARVMQDTV 772

Query: 742  NVALAGKVISQVYEQGKSFDLIVKVKDDARDEMEKIRNLMVDTNDGRKVPLNYVAEVVSS 801
              A+ G+    ++E  + F + +++ D AR +++ +  + V T DG  VPL  VA++  +
Sbjct: 773  AAAIGGRDAGMIFEGDRRFAVTIRLTDAARADLQTLGQVPVPTPDGAFVPLESVADIAVT 832

Query: 802  MGPNTINRENVKRKIVISANVADRDLRSVVNDIQKQVDATIQLPEGYHIEYGGQFESEQA 861
             GPN I+REN KR++V+ ANV  RD+  VV D +  +   ++LP G ++E+GGQFE+ Q+
Sbjct: 833  SGPNQISRENGKRRVVVQANVRGRDVAGVVEDARAAIARDVRLPAGQYLEWGGQFENLQS 892

Query: 862  ASRVLALTSFMSIVIIFLLLYHEFRSVKESGVILLNLPLALIGGVFALVITTGEVSIPAI 921
            AS  L L       +I LLLY    SV+++ ++   +PLAL+GGV AL +     SI A 
Sbjct: 893  ASARLMLVVPACFALIILLLYGALGSVRDAAIVFTGVPLALVGGVLALFLRGMPFSISAA 952

Query: 922  IGFISLFGIATRNGMLLISHYNHLQQVEGLNVYDSVVQGSLDRLNPILMTALSSALALIP 981
            +GFI+L GIA  NG+++++    L    G++  ++  QG+L RL P++MTAL ++L  +P
Sbjct: 953  VGFIALSGIAVLNGLVMVTSIQDL-MARGVSRAEAAYQGALARLRPVVMTALVASLGFVP 1011

Query: 982  LALGGDLPGNEIQSPMAKVILGGLLTSTFLNGFIVPIVYLMMHRQRS 1028
            +A+     G E+Q P+A V++GGL+++T L  F++P +Y    R+ +
Sbjct: 1012 MAIATG-SGAEVQKPLATVVIGGLISATLLTLFVLPTLYARYGRRET 1057