Pairwise Alignments

Query, 1042 a.a., cation efflux system protein, AcrB/AcrD/AcrF family protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1076 a.a., heavy metal efflux pump, CzcA family from Sphingomonas koreensis DSMZ 15582

 Score =  605 bits (1559), Expect = e-177
 Identities = 359/1083 (33%), Positives = 591/1083 (54%), Gaps = 54/1083 (4%)

Query: 1    MLNKIIHYSLHNRLVVLCAAILLLIAGTYTAMHTEVDVFPDLNAPTVVIMTEANGMAAEE 60
            M+ +I+ +++  R  VL   ++    G  +     +D  PD+    V I   A  ++ E 
Sbjct: 1    MIARIVTFAVERRWFVLLVTLIAAAIGAVSLSRLPIDAVPDITNNQVQINVRAPALSPEL 60

Query: 61   VEQLVTFPVETAVNGATGVRRVRSSSTNGFSVVWVEFDWGTDIYLARQIVSEKLAVVSES 120
            VE+ V FP+ETA+ G  G+   RS S NGF+ V   F   TDIY ARQ V+E+L    ES
Sbjct: 61   VEKQVAFPIETALAGVPGLEYTRSLSRNGFAQVTAVFADSTDIYFARQQVAERLRTAEES 120

Query: 121  LPVNVGKPTLGPQSSILGEMLIVG-------------------------------LTADS 149
            LP     P +GP ++ LGE+ +                                 L +++
Sbjct: 121  LPEGA-TPEMGPIATGLGEVYMWTVHMAHRPEDKHRPGEPGIQPDGSYITPEGDRLVSEA 179

Query: 150  TSMLDLRTIADWTIRPRLLSTGGVAQVAVLGGDIKEYQIQLDPERMRHYGVSMGEVMAVT 209
                 LRT  DW + P L S  G+A V  +GG +K+YQ+  D +R+    +S+G++    
Sbjct: 180  DKATYLRTAQDWIVAPLLKSVPGLAGVDSIGGYVKQYQVVPDVQRLAALKLSLGDLATAL 239

Query: 210  QDMNLNANGGVLYEFGNEYIARGVLSTPKVEELGKAVVKTVNNFPVTLEDIADVKIGPKA 269
            +  N     GV+   G     R        ++L + V+ T    P+ L  +A VK+G +A
Sbjct: 240  EQNNAAVGAGVVDRNGEGLTVRSDARIANADQLARTVIATRGGVPILLNQVATVKLG-QA 298

Query: 270  PKLGTASERGKPAVLMTVTKQPATSTLELTDKLEASLQDLQKNLPADVKVSTDIFRQSRF 329
             ++G+ASE G+  V+ T   +   ++  +   + A L  +  +LP D+ +   +  ++  
Sbjct: 299  IRMGSASENGQEVVVGTAIMRIGENSRNVASAVAARLDSINASLPTDIVIQP-VLDRTGL 357

Query: 330  IESSIGNVKKSLFEGGIFVVIVLFLFLANVRTTLISLVTLPLSLLVSILTLHYMGLTINT 389
            + ++I  V K+L EG + VV+VLFL L N R  LI+ + +P+++L++   +   G++ N 
Sbjct: 358  VNATIRTVAKNLSEGALLVVVVLFLLLGNFRAALIAALVIPVTMLMTSFGMLRGGVSANL 417

Query: 390  MSLGGMAIAIGSLVDDAIVDVENVYKRLRENRQKA--EAERFSTLEVVFNASKEVRMPIL 447
            MSLG  A+  G +VD A++ VEN  +R+ E +       ++   L+VV NA++E+  P +
Sbjct: 418  MSLG--ALDFGLIVDGAVIIVENALRRIAERQHHIGRTLDKEERLQVVANAAREMIRPSV 475

Query: 448  NSTLIIVVSFVPLFFLSGMEGRMLVPLGIAFIVALFASTVVALTLTPVLCSYLLGSNKTN 507
                II++ +VPL  L+G+EG+   P+ +  I+AL  + +++LT  P + +  L      
Sbjct: 476  YGQAIIILVYVPLLTLTGVEGKTFAPMALTVILALAFAFILSLTFVPAMLAIWLSKPV-- 533

Query: 508  KELKESFVARWMKGIYEKALTWVLAHKRVTLGSTIVLFLIALGVFFTLGRSFLPSFNEGS 567
             E KE  +  W+K  YE  LT  +A  R T+ + +  FLIA+G F TLG+ FLP  +EG 
Sbjct: 534  -EEKEGRIMGWLKRRYEPGLTQAMARPRTTILTAVGAFLIAIGAFATLGQEFLPQLDEGD 592

Query: 568  FTINISSLPGISLEESNKMGHRAEELLLTIPEIQTVARKTGRAELDEHALGVNVSEIEAP 627
             T  +  +PG S+E+S  M  R E+ +  IPE++ V  KTG AEL    +  N+S+    
Sbjct: 593  ATAQVLRVPGTSVEQSQAMQFRVEKAISAIPEVKFVFSKTGTAELASDPMPPNISDTF-- 650

Query: 628  FELKDR--------PRSELVAEVREKLGTITGANIEIGQPISHRIDAMLSGTKANIAIKL 679
              +KDR        P++ELV ++ + L  + G   EI QPI  R + +++G + +IA+K+
Sbjct: 651  IIMKDRKEWTDPKLPKAELVGKIEKALEGLPGNAFEISQPIQMRFNELIAGVRGDIAVKV 710

Query: 680  FGDDLNKMFSLGNQIKGAISDIPGIADLNVEQQIERPQLKIQPKREMLAKFGITLPEFSE 739
            FGDD + M +  N+I G +  + G  D+ VEQ    P L I+PKR+ +A+ GIT     +
Sbjct: 711  FGDDTDAMNATANKIAGILRTVRGATDVRVEQTEGLPMLDIRPKRDAMAQLGITPRVMQD 770

Query: 740  YVNVALAGKVISQVYEQGKSFDLIVKVKDDARDEMEKIRNLMVDTNDGRKVPLNYVAEVV 799
             V  A+ G+    ++E  + F + +++ D AR +++ +  + V T DG  VPL  +A++ 
Sbjct: 771  TVAAAVGGRDAGMIFEGDRRFAVTIRLDDTARADLQTLGQVPVPTPDGAFVPLESIADIA 830

Query: 800  SSMGPNTINRENVKRKIVISANVADRDLRSVVNDIQKQVDATIQLPEGYHIEYGGQFESE 859
             + GPN I+REN KR++V+ ANV  RD+  VV D +  +DA ++LP G ++E+GGQFE+ 
Sbjct: 831  VTSGPNQISRENGKRRVVVQANVRGRDVAGVVADARAAIDAQVRLPAGEYLEWGGQFENL 890

Query: 860  QAASRVLALTSFMSIVIIFLLLYHEFRSVKESGVILLNLPLALIGGVFALVITTGEVSIP 919
            Q+AS  L L       +I LLLY     V+++ ++   +PLAL+GGV AL +     SI 
Sbjct: 891  QSASARLMLVVPACFALIILLLYGALGRVRDAAIVFTGVPLALVGGVLALFLRGMPFSIS 950

Query: 920  AIIGFISLFGIATRNGMLLISHYNHLQQVEGLNVYDSVVQGSLDRLNPILMTALSSALAL 979
            A +GFI+L GIA  NG+++++    L    G+   ++  QG+L RL P++MTAL ++L  
Sbjct: 951  AAVGFIALSGIAVLNGLVMVTSIQDL-MARGVGRAEAAWQGALARLRPVVMTALVASLGF 1009

Query: 980  IPLALGGDLPGNEIQSPMAKVILGGLLTSTFLNGFIVPIVYLMMHRQRSAGANSPCGVPA 1039
            +P+A+     G E+Q P+A V++GGL+++T L  F++P +Y   + QR    +   GV A
Sbjct: 1010 VPMAIATG-AGAEVQKPLATVVIGGLISATLLTLFVLPTLY-ARYGQRETDLSEAEGVAA 1067

Query: 1040 EQA 1042
            E++
Sbjct: 1068 ERS 1070