Pairwise Alignments

Query, 1042 a.a., cation efflux system protein, AcrB/AcrD/AcrF family protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1035 a.a., acriflavin resistance protein from Cupriavidus basilensis FW507-4G11

 Score =  676 bits (1744), Expect = 0.0
 Identities = 389/1039 (37%), Positives = 608/1039 (58%), Gaps = 12/1039 (1%)

Query: 1    MLNKIIHYSLHNRLVVLCAAILLLIAGTYTAMHTEVDVFPDLNAPTVVIMTEANGMAAEE 60
            ML  I+ +S+  R V+   A LLL  G Y  + +++DVFP+   P V + TEA G++AE+
Sbjct: 1    MLTSIVDFSVRLRGVIFALACLLLGYGAYALLQSKLDVFPEFTPPLVTVQTEAPGLSAEQ 60

Query: 61   VEQLVTFPVETAVNGATGVRRVRSSSTNGFSVVWVEFDWGTDIYLARQIVSEKLAVVSES 120
            VE LVT  VE A+ G+ G+  +RS S  G SVV + F+  TDI  ARQ+V+E LA ++  
Sbjct: 61   VELLVTQRVENALGGSIGLESMRSQSIRGVSVVTLTFNGQTDIRRARQLVAEHLATLTGE 120

Query: 121  LPVNVGKPTLGPQSSILGEMLIVGLTADSTSMLDLRTIADWTIRPRLLSTGGVAQVAVLG 180
            LP  V  P + P SS    +L +GLT+D+ S ++LRT A+WT++PRLLS  GV+ V++ G
Sbjct: 121  LPAGVRAPKMTPLSSATSIVLGIGLTSDTRSPMELRTFAEWTLKPRLLSRAGVSDVSIYG 180

Query: 181  GDIKEYQIQLDPERMRHYGVSMGEVMAVTQDMNLNANGGVLYEFGNEYIARGVLSTPKVE 240
            G+IK+YQ+Q+DP+++   G+S+ +V++ TQ        GVL       +   V  T   E
Sbjct: 181  GEIKQYQVQVDPQKLVRLGLSLHDVVSATQRATGIRGAGVLETPNQRIVLNTVGQTTTAE 240

Query: 241  ELGKAVVKTVNNFPVTLEDIADVKIGPKAPKLGTASERGKPAVLMTVTKQPATSTLELTD 300
            +LG+ VV   N   V L D+ +V +G + P  G A+ +GKP +++ V+ Q    T+ +T 
Sbjct: 241  QLGQVVVLQKNGALVRLADVGNVVLGQELPVSG-ANVQGKPGIVLMVSNQFGADTVSVTR 299

Query: 301  KLEASLQDLQKNLPAD-VKVSTDIFRQSRFIESSIGNVKKSLFEGGIFVVIVLFLFLANV 359
             +EA+L  LQ  L A+ +++  DIFR + FI +S  +++ +L  G   VV VLFLFL NV
Sbjct: 300  NVEAALAALQPMLAANGIQLHADIFRPANFIVASTDHLRTALVVGAALVVSVLFLFLFNV 359

Query: 360  RTTLISLVTLPLSLLVSILTLHYMGLTINTMSLGGMAIAIGSLVDDAIVDVENVYKRLRE 419
            RT  IS   +PLSLL +++ LH+ G+ +NTM+LGG+AIA+G LVDDAI+DVEN+Y+RLRE
Sbjct: 360  RTAFISATAIPLSLLAAVMVLHHFGVALNTMTLGGLAIALGELVDDAIIDVENIYRRLRE 419

Query: 420  NRQKAEAERFSTLEVVFNASKEVRMPILNSTLIIVVSFVPLFFLSGMEGRMLVPLGIAFI 479
            NR  A       + VV  AS EVR  ++ +T  +   F+P+  LSG+ G++  PLG+A+I
Sbjct: 420  NRLLAMP--LPAITVVVKASTEVRSAVIYATFTVAAVFLPVLSLSGVAGKLFAPLGMAYI 477

Query: 480  VALFASTVVALTLTPVLCSYLLGSNKTNKELKESFVARWMKGIYEKALTWVLAHKRVTLG 539
            +A+ +S VVALTLTP LC  LL +  ++ E  E  V +W+K  Y   LT V       + 
Sbjct: 478  LAILSSLVVALTLTPALCYALLANRISDAE--EPRVYQWLKARYAAILTHVEQRWIAVVV 535

Query: 540  STIVLFLIALGVFFTLGRSFLPSFNEGSFTINISSLPGISLEESNKMGHRAEELLLTIPE 599
            +   L L  L        +FLP   EG F  ++ + PG SL+ES ++G R    LL +P 
Sbjct: 536  AFAGLVLATLATLPFFSTAFLPELREGHFIAHMQAAPGTSLQESLRIGERVSHALLEVPN 595

Query: 600  IQTVARKTGRAELDEHALGVNVSEIEAPFE--LKDRPRSELVAEVREKLGTITGANIEIG 657
            I++VA++ GR        G   SE E   +  L    + + +A++R+K+    G      
Sbjct: 596  IRSVAQRVGRTARGIDVFGPQYSEFEIDLKPALDAEAQEQTLADLRDKMAGFPGLTFATE 655

Query: 658  QPISHRIDAMLSGTKANIAIKLFGDDLNKMFSLGNQIKGAISDIPGIADLNVEQQIERPQ 717
              ++ R+   +SG  A + + +FG+DL+ +  L  Q+   +  IPG A++ V+   E PQ
Sbjct: 656  TFLTERVQETISGYTAPVIVNVFGNDLDILDGLARQVSRTLGAIPGAAEVTVQSPPEIPQ 715

Query: 718  LKIQPKREMLAKFGITLPEFSEYVNVALAGKVISQVYEQGKSFDLIVKVKDDARDEMEKI 777
            L I+ +++ L ++G    +  E +  A     ++QVYE    F++ V +   +R    ++
Sbjct: 716  LTIRLRQDQLTRWGFAPLDVMEAIQTAYQSAEVAQVYEANAVFNVAVVLGSASRRSPAQV 775

Query: 778  RNLMVDTNDGRKVPLNYVAEVVSSMGPNTINRENVKRKIVISANVADRDLRSVVNDIQKQ 837
              L +   DG  VPL+ +A++  + G   I  E  +R   ++A++    L   V++ Q++
Sbjct: 776  GELPLRNADGVMVPLSRLADITQTTGRYLILHEGGQRLQTVTAHLNGPSLGQFVSEAQRR 835

Query: 838  VDATIQLPEGYHIEYGGQFESEQAASRVLALTSFMSIVIIFLLLYHEFRSVKESGVILLN 897
            + A ++ P+GY+    G+ +++  A R L +   ++   I LL+Y   RS +   +++ N
Sbjct: 836  IAADVKFPKGYYFALSGEAQAQAQAQRDLLVYFAIAAAGIGLLVYLALRSWRSLVLVMAN 895

Query: 898  LPLALIGGVFALVITTGEVSIPAIIGFISLFGIATRNGMLLISHYNHLQQVEG--LNVYD 955
            LP AL+GG   +  T G +S+ +++GF++LFGI  RN ++LISHY HL QVEG   N+ +
Sbjct: 896  LPFALVGGALTVFATGGLLSLGSMVGFVTLFGITLRNSIMLISHYQHLVQVEGHAWNL-E 954

Query: 956  SVVQGSLDRLNPILMTALSSALALIPLALGGDLPGNEIQSPMAKVILGGLLTSTFLNGFI 1015
            +   G+ +RL PI+MTAL + L L+PLAL    PGNE++ PMA VILGGL TST LN  +
Sbjct: 955  TATLGATERLAPIMMTALVTGLGLLPLALQSGEPGNEVEGPMAIVILGGLFTSTVLNLLV 1014

Query: 1016 VPIVYLMMHR-QRSAGANS 1033
            +P + L   +  R A  N+
Sbjct: 1015 LPTLALRFGKFDRGASENA 1033