Pairwise Alignments

Query, 1042 a.a., cation efflux system protein, AcrB/AcrD/AcrF family protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1042 a.a., cation transporter from Cupriavidus basilensis FW507-4G11

 Score =  585 bits (1507), Expect = e-171
 Identities = 336/1052 (31%), Positives = 588/1052 (55%), Gaps = 39/1052 (3%)

Query: 1    MLNKIIHYSLHNRLVVLCAAILLLIAGTYTAMHTEVDVFPDLNAPTVVIMTEANGMAAEE 60
            M  ++I +++  R +VL A + +   G Y      +D  PD+    V + T A G +  E
Sbjct: 1    MFERLIRFAIEQRWLVLLAVVAMAALGIYNYSRLPIDAVPDITNVQVQVNTSAPGYSPLE 60

Query: 61   VEQLVTFPVETAVNGATGVRRVRSSSTNGFSVVWVEFDWGTDIYLARQIVSEKLAVVSES 120
             EQ VT+P+ETA++G  G+ + RS S  G S V V F  GTDIY ARQ+V++++   +++
Sbjct: 61   TEQRVTYPIETAMSGLPGLEQTRSLSRYGLSQVTVIFKDGTDIYFARQLVNQRIQEAAQN 120

Query: 121  LPVNVGKPTLGPQSSILGEMLIVGLTADSTSM---------LDLRTIADWTIRPRLLSTG 171
            LP  V  P +GP S+ LGE+ +  + A+  +           DLR I DW I+P+L +  
Sbjct: 121  LPTGVA-PQMGPISTGLGEIYLWTVEAEDGARKADGTPYTPTDLREIQDWVIKPQLRTVP 179

Query: 172  GVAQVAVLGGDIKEYQIQLDPERMRHYGVSMGEVMAVTQDMNLNANGGVLYEFGNEYIAR 231
            GV ++  +GG  KEY +   PERM  YG+S+ +V+   +  N N   G +   G +Y+ R
Sbjct: 180  GVTEINSIGGFAKEYLVAPSPERMASYGLSLQDVVVALEKNNANVGAGYIERRGEQYLVR 239

Query: 232  GVLSTPKVEELGKAVVKTVNNFPVTLEDIADVKIGPKAPKLGTASERGKPAVLMTVTKQP 291
                   V+++ + +V +    P+ + D+ADV IG +  + G A++ G+  VL TV    
Sbjct: 240  APGQVRSVDDIREIIVGSAQGQPIRIRDLADVGIGREL-RTGAATDNGREVVLGTVFMLI 298

Query: 292  ATSTLELTDKLEASLQDLQKNLPADVKVSTDIFRQSRFIESSIGNVKKSLFEGGIFVVIV 351
              ++  ++  ++  +  + ++LPA VK  T ++ ++  ++ +I  VKK+L EG I V+++
Sbjct: 299  GENSRAVSQAVDQRMAAINRSLPAGVKAVT-VYDRTVLVDRAIATVKKNLVEGAILVIVI 357

Query: 352  LFLFLANVRTTLISLVTLPLSLLVSILTLHYMGLTINTMSLGGMAIAIGSLVDDAIVDVE 411
            LFLFL N+R  +I+ + +PLS+L +   +    ++ N MSLG  A+  G ++D A+V VE
Sbjct: 358  LFLFLGNLRAAIITALVIPLSMLFTFTGMVTYKISANLMSLG--ALDFGIIIDGAVVIVE 415

Query: 412  NVYKRLRENRQK-----AEAERFSTLEVVFNASKEVRMPILNSTLIIVVSFVPLFFLSGM 466
            N  +RL   +Q+        ERF     VF AS+E R P++   LII++ ++P+F L+G+
Sbjct: 416  NCVRRLAHAQQQHGRPLTRGERFHE---VFAASREARRPLIFGQLIIMIVYIPIFALTGV 472

Query: 467  EGRMLVPLGIAFIVALFASTVVALTLTPVLCSYLLGSNKTNKELKESFVARWMKGIYEKA 526
            EG+M  P+ +  ++AL  + ++++T  P   +  +G     KE +   +  W K  Y   
Sbjct: 473  EGKMFHPMAMTVVLALIGAMILSVTFVPAAVALFIGDKVAEKENR---LMLWAKRAYAPM 529

Query: 527  LTWVLAHKRVTLGSTIVLFLIALGVFFTLGRSFLPSFNEGSFTINISSLPGISLEESNKM 586
            L   +A+  V L    V  L++  V   LG  F+P+ NEG F +    +PG SL +S  M
Sbjct: 530  LGKTIANTPVVLTLAAVAVLLSGLVATRLGSEFIPNLNEGDFAVQALRIPGTSLTQSLAM 589

Query: 587  GHRAEELLLT-IPEIQTVARKTGRAELDEHALGVNVSE------IEAPFELKDRPRSELV 639
              + E  L    PEI+ V  +TG AE+    +  N S+        A +    + R +L+
Sbjct: 590  QQQIETRLKEKFPEIERVFARTGTAEIASDPMPPNASDGYIMLRPRAKWPDPSKTREQLL 649

Query: 640  AEVREKLGTITGANIEIGQPISHRIDAMLSGTKANIAIKLFGDDLNKMFSLGNQIKGAIS 699
            A++  +L TI G   E  QPI  R + ++SG ++++A+K+FGDD   +     ++   + 
Sbjct: 650  AQMEAELATIPGNRYEFSQPIQLRFNELISGVRSDVAVKIFGDDNAVLEDTAQKVATVLR 709

Query: 700  DIPGIADLNVEQQIERPQLKIQPKREMLAKFGITLPEFSEYVNVALAGKVISQVYEQGKS 759
             +PG  ++ VEQ    P L +   R   A++G+ + +  + V +A+ G+     ++  + 
Sbjct: 710  AVPGATEVKVEQTSGLPMLTVDVDRARAARYGLNMIDVQDTVAIAVGGRDAGIFFQGDRR 769

Query: 760  FDLIVKVKDDARDEMEKIRNLMVDTNDGRK-----VPLNYVAEVVSSMGPNTINRENVKR 814
            F++ V++ +  R ++E +R L +    G       +PL  VA +  + GPN ++REN KR
Sbjct: 770  FNIGVRLPEGIRGDVEALRRLPIPLPKGSTAAASYIPLGEVATLTLAPGPNQVSRENGKR 829

Query: 815  KIVISANVADRDLRSVVNDIQKQVDATIQLPEGYHIEYGGQFESEQAASRVLALTSFMSI 874
            +IV+SANV  RD+ + V +    +D  +++P GY + +GG FE  Q+A+  L +   +++
Sbjct: 830  RIVVSANVRGRDVGTFVPEAMASLDRQVKVPAGYWVTWGGTFEQLQSAATRLQIVVPVAL 889

Query: 875  VIIFLLLYHEFRSVKESGVILLNLPLALIGGVFALVITTGEVSIPAIIGFISLFGIATRN 934
            +++F+LL+  F +V++  ++   +P AL GG+ AL +    +SI A +GFI+L G+A  N
Sbjct: 890  LMVFVLLFAMFGNVRDGLLVFTGIPFALTGGILALWLRGIPLSISAAVGFIALSGVAVLN 949

Query: 935  GMLLISHYNHLQQVEGLNVYDSVVQGSLDRLNPILMTALSSALALIPLALGGDLPGNEIQ 994
            G++++S    L++ +G  + +++  G+L RL P+LMTAL ++L  IP+A+     G E+Q
Sbjct: 950  GLVMLSFIRSLRE-DGKPLDEAIHTGALTRLRPVLMTALVASLGFIPMAIATG-TGAEVQ 1007

Query: 995  SPMAKVILGGLLTSTFLNGFIVPIVYLMMHRQ 1026
             P+A V++GG+L+ST L   ++P++Y + HR+
Sbjct: 1008 RPLATVVIGGILSSTALTLLVLPVLYRLAHRR 1039