Pairwise Alignments

Query, 1042 a.a., cation efflux system protein, AcrB/AcrD/AcrF family protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1049 a.a., cytochrome C peroxidase from Cupriavidus basilensis FW507-4G11

 Score =  545 bits (1405), Expect = e-159
 Identities = 344/1031 (33%), Positives = 555/1031 (53%), Gaps = 23/1031 (2%)

Query: 1    MLNKIIHYSLHNRLVVLCAAILLLIAGTYTAMHTEVDVFPDLNAPTVVIMTEANGMAAEE 60
            ML  +I +SL  R +VL AA +L +AG +  +   +D FPD++   V ++ +  GM  EE
Sbjct: 1    MLAGLIEFSLRQRALVLIAACVLAVAGAWAYLKLPIDAFPDISPTQVKVILKIPGMTPEE 60

Query: 61   VEQLVTFPVETAVNGATGVRRVRSSSTNGFSVVWVEFDWGTDIYLARQIVSEKLAVVSES 120
            VEQ V+ P+E  + G      VRS S  G S V V+F+ G D Y ARQ VSE+LA +   
Sbjct: 61   VEQRVSTPIEQELLGIPHKTIVRSVSKYGISDVTVDFEEGVDSYWARQQVSERLAGLLRD 120

Query: 121  LPVN-VGKPTLGPQSSILGEMLIVGLTADSTSMLDLRTIADWTIRPRLLSTGGVAQVAVL 179
            LP N +G   L P ++ LGEM +  +  D+ S+ + R + DW +RP L +  GVA V  L
Sbjct: 121  LPPNAIGG--LAPITTPLGEMFMFTVEGDAFSLAERRRVLDWVLRPALRTVPGVADVNAL 178

Query: 180  GGDIKEYQIQLDPERMRHYGVSMGEVMAVTQDMNLNANGGVLYEFGNEYIAR---GVLST 236
            GG+++ Y++  DP R+R   V++ ++       N N   G + +    ++ R   GV   
Sbjct: 179  GGEVRSYEVIPDPARLRARAVTVEQLRQALDANNRNDGAGRVEQGDENWVVRVEGGVRGV 238

Query: 237  PKVEELGKAVVKTVNNFP-VTLEDIADVKIGPKAPKLGTASERGK-PAVLMTVTKQPATS 294
              + ++  A     N  P VT+ D+A V++G  A + G  S+ G+  AV   V       
Sbjct: 239  EDLRQVAVAAPGGRNGMPLVTVGDVATVRLGV-ATRNGAVSKDGRGEAVQGLVLALRGAD 297

Query: 295  TLELTDKLEASLQDLQKNLPADVKVSTDIF-RQSRFIESSIGNVKKSLFEGGIFVVIVLF 353
              +L   ++A L  L   LP  +  ST +F  +   +  +   V ++L E  + VV+ L+
Sbjct: 298  ARQLVADVQARLDALAPQLPKGM--STHVFYNRGELVTRAANTVVRALIEASLLVVVTLY 355

Query: 354  LFLANVRTTLISLVTLPLSLLVSILTLHYMGLTINTMSLGGMAIAIGSLVDDAIVDVENV 413
            LFL  +R  L+   TLPLS+L + + + Y+GLT N MSLGG+AIA+G LVD A+V VEN+
Sbjct: 356  LFLGGLRAALVVAATLPLSMLATFMLMRYVGLTANLMSLGGLAIALGMLVDAAVVVVENI 415

Query: 414  YKRLRENRQKAEAERFSTLEVVFNASKEVRMPILNSTLIIVVSFVPLFFLSGMEGRMLVP 473
               L +  ++ +++      V+ +A   V +P+L    II + F+PL  L G+EG++  P
Sbjct: 416  ESALAKAHER-KSDPSLRGAVIRHAVASVAVPMLAGVSIIAIVFLPLLSLQGLEGKLFGP 474

Query: 474  LGIAFIVALFASTVVALTLTPVLCSYLLGSNKTNKELKESFVARWMKGIYEKALTWVLAH 533
            + +  ++AL +S  +A T+ P L S LL ++          VAR    + +    W   H
Sbjct: 475  VALTIVLALASSVAIAFTVVPALASLLLRTHADESPYLMRKVARGFARLQD----WSARH 530

Query: 534  KRVTLGSTIVLFLIALGVFFTLGRSFLPSFNEGSFTINISSLPGISLEESNKMGHRAEEL 593
             R    S  V   +A+ ++ ++G++F+P+ +EG   + +   P +SL  S  +  R ++ 
Sbjct: 531  PRAVFASAGVALAVAVALYLSVGKTFMPTMDEGDMIVQLQKAPSVSLATSVGLDLRVQQA 590

Query: 594  LLT-IPEIQTVARKTGRAELDEHALGVNVSEIEAPFELKDRPRS---ELVAEVREKLGTI 649
            LL  +PEI+++  ++G  +L    +G+N ++       KD+ R    ++ + +R  +   
Sbjct: 591  LLAEVPEIRSIVARSGSDDLGLDPMGLNETDTFLALRPKDQWRGSKEDIASAIRRVMERF 650

Query: 650  TGANIEIGQPISHRIDAMLSGTKANIAIKLFGDDLNKMFSLGNQIKGAISDIPGIADLNV 709
             G      QPI  R+  ML+GT+ ++AIK+FG DL  + +    I   +  IPG A++  
Sbjct: 651  PGVVYGFTQPIEMRVSEMLTGTRGDVAIKVFGSDLGAIDTAAQAIAARVRKIPGAAEVIA 710

Query: 710  EQQIERPQLKIQPKREMLAKFGITLPEFSEYVNVALAGKVISQVYEQGKSFDLIVKVKDD 769
                    L +   R  + + G++       +   + G+ I  V E      LI++  D 
Sbjct: 711  PSNEGVQYLTLALDRAAVGRAGLSGDALQALLRAQVEGERIGIVPEGTVRTPLILRGSDS 770

Query: 770  ARDEMEKIRNLMVDTNDGRKVPLNYVAEVVSSMGPNTINRENVKRKIVISANVADRDLRS 829
             R   E   +L V   DG   PL  +A+V    GP  IN E+  R  VI  +V  RDL  
Sbjct: 771  LRQTPETFTSLQVTAPDGTSWPLTSLAQVRRVEGPVRINHEDGGRFAVIQVSVEGRDLTG 830

Query: 830  VVNDIQKQVDATIQLPEGYHIEYGGQFESEQAASRVLALTSFMSIVIIFLLLYHEFRSVK 889
             V + Q  V     LP+G  + +GGQFE++Q A+  LAL   +++  IFLLL   FRS++
Sbjct: 831  FVQEAQTSVAGLAGLPKGLRVAWGGQFENQQRAAARLALVVPLALGAIFLLLMLTFRSIR 890

Query: 890  ESGVILLNLPLALIGGVFALVITTGEVSIPAIIGFISLFGIATRNGMLLISHYNHLQQVE 949
            ++ +++ N+P AL+GG+ AL +    +S+PA +GFI+L GIA  NG++L+SH+N L + E
Sbjct: 891  QAALVIANIPFALVGGIAALRVAGEYLSVPASVGFIALLGIAVLNGVVLVSHFNTLLE-E 949

Query: 950  GLNVYDSVVQGSLDRLNPILMTALSSALALIPLALGGDLPGNEIQSPMAKVILGGLLTST 1009
            GL + ++V  G  DRL P+LMTA  +AL +IPL L    PG+EIQ P+A V+ GGL++ST
Sbjct: 950  GLPMAEAVRTGVRDRLRPVLMTACITALGMIPLLLASG-PGSEIQRPLAIVVSGGLVSST 1008

Query: 1010 FLNGFIVPIVY 1020
             L   ++P+++
Sbjct: 1009 ALTLLLLPLLF 1019