Pairwise Alignments

Query, 229 a.a., hemolysin III (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 236 a.a., hemolysin III family channel protein (RefSeq) from Shewanella loihica PV-4

 Score =  110 bits (276), Expect = 2e-29
 Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 8/210 (3%)

Query: 19  YNNVEEWANTLSHGAGILLGVIAGYFLLAKAAAGAEPKWAVACVTVYLFGMLSSYVSSTW 78
           Y+  EE AN LSHG G++ G++A  F L K          +  + +Y   ++  ++ ST 
Sbjct: 31  YSRAEELANALSHGLGVIAGILALAFSLHKGWDRLT-NLQLGGLALYCLSIILLFLCSTL 89

Query: 79  YHGSRPGKLKELLRKFDHGAIYLHIAGTYTPFTLLVMRHAGGWGWGIFSFVWLSAIVGFI 138
           YH     KLK  L+  DH AIYL IAGTYTP   +++         I   +W  A+ G +
Sbjct: 90  YHSVSAPKLKHKLKIADHCAIYLLIAGTYTPLMQILLDSVE--ADAILIAIWSLALGGIL 147

Query: 139 LSFKKLKEHSNLETACYIAMGACILVAMKPLMDHLAEMGAGPAFWWLIGGGVSYIIGAVF 198
                +          Y+ MG   ++ MK L+  +  +G    F  L+ GG+ Y  G +F
Sbjct: 148 FKTLFIHRFKIFSLVLYLVMGWLCVIVMKQLLAAMTPLG----FQLLLAGGIFYSTGVIF 203

Query: 199 Y-SLRKPYMHATFHLFCLGGSIGHIIAIWL 227
           Y   R PY HA +HLF L G++ H + ++L
Sbjct: 204 YVGKRIPYNHAIWHLFVLAGALSHFLCVYL 233