Pairwise Alignments

Query, 201 a.a., Holliday junction DNA helicase ruvA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 194 a.a., Holliday junction branch migration protein RuvA from Pedobacter sp. GW460-11-11-14-LB5

 Score =  167 bits (423), Expect = 1e-46
 Identities = 92/202 (45%), Positives = 132/202 (65%), Gaps = 9/202 (4%)

Query: 1   MIEYVRGELAELSPATAVIDCNGVGYAANISLNTYSAIQGKKNCKLYIYEAIREDAYVLY 60
           M  Y+ G+L   +PA  V++  G+GY  NISLNTYSA+   + CKLY +  ++EDA+ LY
Sbjct: 1   MYAYIDGKLTFKNPAYVVVEAGGIGYHINISLNTYSALGDAERCKLYTWLHVKEDAHTLY 60

Query: 61  GFADKQEREIFLLLISVSGIGGNTARMILSALSPAELVNVISTENANLLKTVKGIGLKTA 120
           GFAD+ ER +FL LISVSGIG NT RMILS+++P E+   I   +  L++ +KG+G KTA
Sbjct: 61  GFADEGERRLFLHLISVSGIGPNTGRMILSSITPIEIQTAIVKADLPLIQRIKGLGAKTA 120

Query: 121 QRVIVDLKDKIKTMGATVAGGSASAGMLLQSASVEVQEEAVAALTMLGFAAAPSQKVVLA 180
           QR++++L+DK+K  GA          ++       V++EA++AL MLGFA   ++K +  
Sbjct: 121 QRLVLELQDKLKKEGAD--------SLISMPQHNTVKDEALSALVMLGFAKQTAEKTIDQ 172

Query: 181 ILK-EEPDAPVEKVIKLALKRL 201
           ILK  E    VE++IK ALK L
Sbjct: 173 ILKVTEGTLSVEQLIKQALKTL 194