Pairwise Alignments

Query, 201 a.a., Holliday junction DNA helicase ruvA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 203 a.a., Holliday junction branch migration protein RuvA from Klebsiella michiganensis M5al

 Score =  111 bits (278), Expect = 8e-30
 Identities = 69/204 (33%), Positives = 116/204 (56%), Gaps = 9/204 (4%)

Query: 1   MIEYVRGELAELSPATAVIDCNGVGYAANISLNTYSAIQGK-KNCKLYIYEAIREDAYVL 59
           MI  +RG + E  P   +++  GVGY  ++ +  +  +    K   ++ +  +REDA +L
Sbjct: 1   MIGRLRGIILEKQPPLVLLETGGVGYEVHLPMTCFYELPDVGKEAIIFTHFIVREDAQLL 60

Query: 60  YGFADKQEREIFLLLISVSGIGGNTARMILSALSPAELVNVISTENANLLKTVKGIGLKT 119
           YGF +KQER +F  LI  +G+G   A  ILS +S  + VN +  E    L  + GIG KT
Sbjct: 61  YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREELAALVKLPGIGKKT 120

Query: 120 AQRVIVDLKDKIKTMGATVAGGSASAGMLLQS----ASVEVQEEAVAALTMLGFAAAPSQ 175
           A+R+IV++KD+ K +   +   + +A ++L S    +  + ++EAVAAL  LG+    + 
Sbjct: 121 AERLIVEMKDRFKGLHGDLF--TPAADLVLTSPAGPSDDDAEQEAVAALVALGYKPQEAS 178

Query: 176 KVVLAILKEEPDAPVEKVIKLALK 199
           ++V  I++  PDA  E +I+ AL+
Sbjct: 179 RMVSKIVR--PDANSETLIREALR 200