Pairwise Alignments

Query, 201 a.a., Holliday junction DNA helicase ruvA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 192 a.a., Holliday junction DNA helicase RuvA from Herbaspirillum seropedicae SmR1

 Score =  114 bits (285), Expect = 1e-30
 Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 14/202 (6%)

Query: 1   MIEYVRGELAELSPATAVIDCNGVGYAANISLNTYSAIQGK-KNCKLYIYEAIREDAYVL 59
           MI  + G L E  P   ++DC GVGY   + ++TY  +    +   L  + AIREDA++L
Sbjct: 1   MIGRLSGILLEKLPPNLLVDCQGVGYEVAVPMSTYYNLPALGEKVTLLTHLAIREDAHIL 60

Query: 60  YGFADKQEREIFLLLISVSGIGGNTARMILSALSPAELVNVISTENANLLKTVKGIGLKT 119
           +GF   +ER  F  LI +SG+G  TA  ILS +S A+L   ++ + A  L  V GIG KT
Sbjct: 61  FGFGTAEERNTFKELIKISGVGARTALSILSGMSVADLAQAVTLQEAGRLTRVPGIGKKT 120

Query: 120 AQRVIVDLKDKIKTMGATVAGGSASAGMLLQSASVEVQEEAVAALTMLGFAAAPSQKVVL 179
           A+R++++LK K   +GA +    A AG++   AS ++    + AL  LG++    ++  L
Sbjct: 121 AERLLLELKGK---LGADL---GAVAGVVHSDASADI----LNALLALGYS---DKEATL 167

Query: 180 AILKEEPDAPVEKVIKLALKRL 201
           A+ +   D+ V   IKLALK L
Sbjct: 168 AMKQVPKDSTVSDGIKLALKAL 189