Pairwise Alignments

Query, 1065 a.a., multidrug resistance protein, AcrB/AcrD family (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1044 a.a., hydrophobe/amphiphile efflux-1 (HAE1) family transporter from Dechlorosoma suillum PS

 Score =  723 bits (1867), Expect = 0.0
 Identities = 419/1038 (40%), Positives = 610/1038 (58%), Gaps = 24/1038 (2%)

Query: 4    RTFIERPVLSAVISITIVVVGIIGLFSLPVEQYPDIAPPTIMVSTTYYGASAETLQKSVI 63
            R FI RP+ ++VISI IV+ GI+    LP+ QYP+IAPPT+++S +Y GASAETL K+V 
Sbjct: 3    RFFINRPIFASVISIVIVIAGIMASRVLPISQYPEIAPPTVIISASYPGASAETLAKTVA 62

Query: 64   APLEEAINGVEDMTYMTSTATNAGTVSITVYFKQGTDPDMAAVNVQNRVSRATGQLPAEV 123
            AP+EE ++GVE++ Y  STA+  G++SIT  F+ GTD DMA VNV NRV  A  +LP  V
Sbjct: 63   APIEEQLSGVENLMYFNSTASANGSLSITATFEVGTDVDMATVNVNNRVKIAEPRLPDVV 122

Query: 124  TQVGVTTSKRQTSILQMFSLSSPDDSYDENFLSNYISINIKPQILRISGVGDLMIMGG-E 182
             Q GVT  KR   IL + +++SP+ +    +LSNY  +NI   + RI GVGD  I G  +
Sbjct: 123  RQYGVTVQKRSNDILMVAAITSPEGTRTPLYLSNYALVNILDDLKRIPGVGDAQIFGALD 182

Query: 183  YSMRVWMKPDVMAQYKLIPSDITGVLAEQNIESATGSFGEN---SNETYQYTMKYKGRLI 239
            YSMR+W++PD MAQ  +  ++I+  +A QN ++A G  G+    + +   YT+  KGRL 
Sbjct: 183  YSMRLWLRPDRMAQLGVTTTEISNAIAAQNKQNAAGKIGQEPAPNGQQLVYTVTAKGRLT 242

Query: 240  TPEEFGDIVIRSTDNGEVLKLKDIAEVQLGQDSYAYHGGMDGHPGVSCMVFQTAGSNATE 299
            TPE+FG+IVIR+      L LKD+A V+LG  +Y     + G P V   +F  +G+NA +
Sbjct: 243  TPEQFGNIVIRADGPKGALYLKDVARVELGAQNYDASTALMGKPVVGVGIFLQSGANALD 302

Query: 300  VNQNIDELLEEVRKDLPKGVELTQIMSSNDFLFASIHEVVKTLIEAIILVILVVYVFLQD 359
            V + +   ++E+++  P  V+      +  F+ ASI EVV TL+EA++LV +VV+VFLQ+
Sbjct: 303  VAKKVKLRMDELKQKFPSDVDYVVPFDTTKFVQASITEVVHTLVEALVLVAIVVFVFLQN 362

Query: 360  FRSTLIPLVGVIVSLIGTFAFMALAGFSINLLTLFALVLVIGTVVDDAIIVVEAVQARFD 419
            +R+T+IPLV V VSLIGTFA + L GFSIN LTLFA+VL IG VVDDAI+V+E V+    
Sbjct: 363  WRATVIPLVAVPVSLIGTFAGLWLFGFSINTLTLFAMVLAIGIVVDDAIVVLENVERLMW 422

Query: 420  VGYRSSYMASIDAMKGISNAVITSSLVFMAVFIPVSFMGGTSGTFYTQFGLTMAVAVGIS 479
                +   A+I+AM+ +S+AV+   LV  AVFIPV+F+GG +G  Y QF +T+A++V +S
Sbjct: 423  EEKMAPKEAAIEAMREVSSAVVAIVLVLCAVFIPVAFLGGIAGMLYKQFAVTVAISVTLS 482

Query: 480  AINALTLSPALCALLLKPYINEDGTQKNNFAASFRKAFNSAFDILIEKYKNVVLIFIKRR 539
             I ALTL+PALCALLL+P        K+   A FR  FN  F+   + Y + V   +  R
Sbjct: 483  GIVALTLTPALCALLLQP--------KHEEPAIFRP-FNRLFERFTKSYTDTVNKTLHHR 533

Query: 540  WLAWSLLVCSVVL--LVFLMNTTKTSLVPDEDQGVVFVNVSTAAGSSLTTTDEVMERIEK 597
             +    + C V+L    F+        VP EDQG +   +    G+SL  T    ++ + 
Sbjct: 534  IIG--TVACVVILGGSFFMFRAVPGGFVPAEDQGYLISALMLPDGASLQRTRATGDQFQS 591

Query: 598  RLMDIPQIKHVQKVAGYGLLAG-QGSSFGMLILKLKPWDERPNDEDNVQAVIGQVYGRTA 656
             +     +  V  +AG  ++ G    + G + + LK WDER    D++     +  G   
Sbjct: 592  MIKQDEAVDRVFVIAGNDIIGGGMKPNAGTVFIPLKDWDERKAGADDLAK---KFMGMGM 648

Query: 657  DIKDASVFAISPGMIPGYGMGNALELHMQDKMGGDINEFFTTTQQYLGVLNQRPEIAMAY 716
             + D      +P  I G G     E ++Q +   D  +     QQ++  L +R E+    
Sbjct: 649  MLPDGLGLVFNPPAIRGLGNAGGFEAYIQARGDADPQKLSGVVQQFMEGLKKRQELVGIN 708

Query: 717  STFDVRYPQWTVEVDAAKCKRAGITPDAVLSTLSGYYGGQYVSNFNRFSKVYRVMIQADP 776
            + F    PQ +VEV+ AK    GI    V  TL    G  YV++FN   + YRV +QAD 
Sbjct: 709  TFFRPTSPQLSVEVNEAKAISMGIAVSDVYQTLQATMGTLYVNDFNLNGRTYRVQLQADG 768

Query: 777  QFRLDETSLDNAFVRMSNGEMAPLSQFVTLTRSYGAESLSRFNMYNSIAVNAMPADGYST 836
            QFR     L   +V+ S+G M P+S  + +    G E L RFN + S  V        ST
Sbjct: 769  QFRSKPEDLGRVYVKSSSGSMVPVSALIKVKSVVGPEQLERFNGFLSAKVMGSSVPKVST 828

Query: 837  GDAIKAVQETAVQSLPKGYGYDYGGITREENQQSGTTMIIFGICFLMIYLILSALYESFI 896
            GDAIK V+E A ++LP GY  ++ G   +E +   T+ + FG   +M++LIL+A YE + 
Sbjct: 829  GDAIKIVEEVAKETLPAGYELEWTGQAFQEKRTGTTSAVAFGFGIIMVFLILAAQYEKWS 888

Query: 897  IPFAVLLSVPCGLMGSFLFAWMFGLENNIYLQTGLIMLIGLLAKTAILLTEYAAERRKAG 956
            +P AV+L+VP  L G+     + G+ N+IY Q GL++LIGL AK AIL+ E+AA++R  G
Sbjct: 889  LPLAVILAVPFALFGALAAVMIRGMPNDIYFQIGLVVLIGLAAKNAILIVEFAAQKRAEG 948

Query: 957  MGLIASAVSAAKARLRPILMTALTMIFGLFPLMLSSGVGANGNRSLGTGVVGGMTIGTLA 1016
            +G++ +A+  A+ R RPI+MT+L  I G+FPL+ ++G GA   +S+GTGV GGM   T  
Sbjct: 949  LGVLEAALEGARLRFRPIVMTSLAFILGVFPLVKATGAGAAARKSMGTGVFGGMLAATFI 1008

Query: 1017 LLFIVPTLFIAFQWLQER 1034
                +P   + F WL  R
Sbjct: 1009 ATIFIP---MFFTWLSGR 1023