Pairwise Alignments

Query, 326 a.a., Fe3+ ABC transporter, permease protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 345 a.a., ABC-type Fe3+-siderophore transport system, permease component from Pseudomonas stutzeri RCH2

 Score =  172 bits (435), Expect = 1e-47
 Identities = 113/336 (33%), Positives = 182/336 (54%), Gaps = 22/336 (6%)

Query: 8   LFSILITLTVGLFLLDLAVGAVNIPIRDVWAA---LTGGNCSRA----TEKIVLNIRLIK 60
           LF +L  L +    L LA+G +++ + D  AA   L G    +A     E ++  IRL +
Sbjct: 10  LFVVLGLLLLTAIWLSLALGPLSLTLGDSLAAALRLLGAPIEQAGLEQAELVLAKIRLPR 69

Query: 61  AIVALLAGAALSVSGLQMQTLFRNPLAGPYVLGISSGASLGVALVVLAGI--------GS 112
            ++   AGA L++ G+ MQ LFRNPLA P ++G+SSGA+LG A+ ++             
Sbjct: 70  TLLGCAAGAVLALCGVAMQGLFRNPLADPGLVGVSSGAALGAAVAIVGATFVPALPLSWE 129

Query: 113 SIGIAGAAWVGAAVVLLVITAVGQRIKD--IMVILILGMMFSSGVGAVVQILQYLSKEES 170
              ++  A++G   V L++  +G+R     +  +L+ G+  ++  GAVV +  YL+ + +
Sbjct: 130 PYLLSAFAFIGGLGVTLLVYRLGRRDGQTHVATMLLSGIALTALAGAVVGLFTYLADDRT 189

Query: 171 LKAFVIWTMGALGDVTSGQLLILVPSVFAGLLLAVLTIKPLNLLLFGEEYAVTMGLNIRR 230
           L++   W +G+L   +  +L  L+    A         K LN LL GE  A  +G N+ R
Sbjct: 190 LRSLTFWNLGSLNGASYVRLWPLLLITIAVAFWLPQRAKALNALLLGESEARHLGFNVER 249

Query: 231 SRSLLFLSTTLLAGTITAFCGPIGFIGLAMPHVTRMLFQNSDHHVLLPGTILSGASILLL 290
            +  L + T L  G   A  G IGFIGL +PH+ R+L    DH +LLP + L+GAS+LLL
Sbjct: 250 IKRELVVCTALGVGAAVAAAGLIGFIGLVVPHLMRLLV-GPDHRLLLPASALAGASLLLL 308

Query: 291 CDIISKIF----TLPINAITALLGIPIVVWVVLRNK 322
            D+ +++      LPI  +TALLG P  ++++LR +
Sbjct: 309 ADVAARLVIAPAELPIGIVTALLGAPFFLYLLLRER 344