Pairwise Alignments

Query, 285 a.a., transcriptional regulator, AraC-type (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 283 a.a., transcriptional regulator from Azospirillum brasilense Sp245

 Score =  148 bits (373), Expect = 2e-40
 Identities = 92/284 (32%), Positives = 143/284 (50%), Gaps = 7/284 (2%)

Query: 4   KKTTKEEYQKCVNVVVEYINQHLGEDIDLKSLARISNFSPFYFHRIMKAFLGEPIGTFIV 63
           K  T  +Y + +  V+++I  HL E ++L+ LA ++ FSP++FHRI +A  GE     + 
Sbjct: 3   KPDTLLDYGRRIERVIDHIAAHLDETLELERLAAVACFSPYHFHRIYRAMAGETAADTLR 62

Query: 64  RTRTEAAARLLRYSDIPIADIAYRIGYSSPSSLSKVFRQFYGISPLEYRNNKNFVIMKPA 123
           R R   AA  L      +  +A R GY S  + ++ F Q YG+SP  YR     V   P+
Sbjct: 63  RLRLHRAAGDLVKGGDGMVQVARRAGYGSVEAFTRAFGQVYGLSPGAYRRQGRLV--PPS 120

Query: 124 IIRPDLELKSE---IKSIPARNVIYIRLSGDYKLNDYGGTWGRLWQFIKEQKLPMGDFSP 180
              PD E       I+ +P   V  +   G Y   + G T+ RL+ +   + L   +   
Sbjct: 121 DQPPDEERSMHDVTIRDLPPLRVAAMAHQGPYM--NIGTTFERLYAWAAGRGLVGPETRS 178

Query: 181 LCIYHDDPKVTPAEKLRTDVCMVMPVQVAPKGDVGFKTLPAGRYAIFLYKGTYDNLQAVY 240
             +Y+DDP+  PA++LR++  +++   +   G V    +  GR+A+ ++KG Y  L+  Y
Sbjct: 179 FALYYDDPESVPADQLRSEAALLLDGPIPEDGAVHPLEIAGGRHAVLIHKGPYAELERPY 238

Query: 241 DTIYGKCLPEMECTLRDEPSAERYLNNPCETAPEELLTEIYIPV 284
             +Y   LP    T  D P  E YLNNP    PEE LTEI +P+
Sbjct: 239 RWLYRDWLPSSGHTPADRPCVEEYLNNPRTLPPEEWLTEIRLPL 282