Pairwise Alignments

Query, 285 a.a., transcriptional regulator, AraC-type (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 277 a.a., AraC family transcriptional regulator from Cupriavidus basilensis FW507-4G11

 Score =  121 bits (303), Expect = 2e-32
 Identities = 78/288 (27%), Positives = 140/288 (48%), Gaps = 18/288 (6%)

Query: 4   KKTTKEEYQKCVNVVVEYINQHLGEDIDLKSLARISNFSPFYFHRIMKAFLGEPIGTFIV 63
           K  T+ +Y + +  V+ ++  H   D  L  LA ++  SP++FHR+ +A +GE +   + 
Sbjct: 2   KPETRIQYAQRMEPVLRWLASHPDADPQLYQLADLACLSPYHFHRVYRAMMGETVNATVQ 61

Query: 64  RTRTEAAARLLRYSDIPIADIAYRIGYSSPSSLSKVFRQFYGISPLEYRNNKN--FVIMK 121
           R R   AA  L  ++  + D+A R GY S ++ ++ F   +GI P  YR  ++  F   +
Sbjct: 62  RLRMHRAAIALAGTEASLRDVALRAGYESDAAFNRAFGAAFGIPPGRYRAARSGPFNPQE 121

Query: 122 PAIIRPDLELKSEIKSIPARNVIYIRLSGDYKLNDYGGTWGRLWQFIKEQKLPMGDFSPL 181
           P +          I++ P   +  +   G Y+  + G  + R++     + L   D    
Sbjct: 122 PGM------YPITIETFPGTVLATLPHRGSYQ--EIGPVFTRIFMLAASRGLASPDAIGF 173

Query: 182 CIYHDDPKVTPAEKLRTDVCMVMPVQVAPKGDVGFK----TLPAGRYAIFLYKGTYDNLQ 237
            +Y  DP+  P  +LR+    +  + VAP  D+G +     +PAGR A+  Y G Y+ + 
Sbjct: 174 GVYFSDPEQVPVAQLRS----LAGLSVAPDADLGEELERFEIPAGRCAMLTYTGPYNEMS 229

Query: 238 AVYDTIYGKCLPEMECTLRDEPSAERYLNNPCETAPEELLTEIYIPVE 285
             Y+ ++ + LP       + P  E+Y+N+P  T P +L T I +PV+
Sbjct: 230 KAYNWMFSEWLPSSRVVPANFPMFEQYVNDPRTTPPAQLQTRICLPVK 277