Pairwise Alignments

Query, 337 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 375 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  131 bits (330), Expect = 2e-35
 Identities = 75/204 (36%), Positives = 115/204 (56%), Gaps = 5/204 (2%)

Query: 132 GSKTKLYLPDGTLVWLNAGSRMTYSQGFGVD-NRKVELEGEGYFEVKRNEKIPFFVKTKD 190
           G    + LPDG+ VWLNA S + Y   F    +R+VEL GEGYFE++++   PF V T  
Sbjct: 169 GETQAVVLPDGSKVWLNALSSLKYPASFASSKDRRVELTGEGYFEIEKDGAHPFIVSTDK 228

Query: 191 LQLQVLGTKFNFRDYPEDHEVVVSLLEGKVGLNNLLREEKEAVLSPDERAVLNKANGLLT 250
            +++VLGT FN   Y ++     +LLEG V + ++       +L P +++ L   N  LT
Sbjct: 229 QEVEVLGTHFNINSYTDEMATKTTLLEGSVKV-SIRNGNGNKILEPGKQSTL--LNNKLT 285

Query: 251 VESVTASNASQWTDGYLFFDEELLPDIAKELERSYNVKIHIANDSLKTFRFYGNFVRREQ 310
           +  V   +   W DG+  F  E L DI K++ R YNV+I   ++SLKT +F G+ V R  
Sbjct: 286 ISDVDVDDEVAWKDGFFVFSNEPLSDILKQVSRWYNVEIEYQDESLKTKKFSGS-VSRYA 344

Query: 311 NIQEVLEALASTEKMQYKIEERNI 334
            + +VL  L  T+ + +KI+++ I
Sbjct: 345 KVSQVLRKLEFTKSVVFKIKDQKI 368