Pairwise Alignments

Query, 337 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 337 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  129 bits (324), Expect = 1e-34
 Identities = 96/343 (27%), Positives = 163/343 (47%), Gaps = 19/343 (5%)

Query: 5   NKHIDELIANYLTEGLDKNALDELKTWIAASAENQQYFIRQREIWFSAVSREAASVYDKD 64
           ++   EL+   L   +  +   ELK+ +A ++  +  + R  + +F A + E  ++   D
Sbjct: 3   DQRFTELLGKQLAGEISPDESVELKSILAGNSSLRAEYERL-QTYFDAEAVEDENI---D 58

Query: 65  KAFENFRNRVESQKEIQSTSRRGFSLSALWRYAAVVAIIIAVGCISYWQGEV--NVKDTF 122
             F+  + +++   E   T  +    S  ++ AAV+AI IA G + Y +  +  N  D  
Sbjct: 59  LVFDRIKTQIKVSAESGLTFTKNKPYSIWFKIAAVLAIFIA-GVLVYNRETIFFNKTDQL 117

Query: 123 ADISVEAPLGSKTKLYLPDGTLVWLNAGSRMTYSQGFGVDNRKVELEGEGYFEVKRNEKI 182
               V         L L DG+ V +N+GS + Y + F  D R V L GE +F+VK++ K 
Sbjct: 118 PLTQVLTKAAEVKTLVLADGSTVKINSGSSLKYPEHFTADTRDVYLSGEAFFDVKKDPKH 177

Query: 183 PFFVKTKDLQLQVLGTKFNFRDYPEDHEVVVSLLEGKVGLNNLLREEKEAVLSPDERAVL 242
           PF V T+ L ++VLGT F+ + Y  D     +L+ GKV ++      +  +L P+++  L
Sbjct: 178 PFIVHTEQLAVKVLGTAFDVKAYQNDAFTETTLIRGKVSISLKNNTAQTFILKPNDKFTL 237

Query: 243 NKANGLLTVESVTASNA--------SQWTDGYLFFDEELLPDIAKELERSYNVKIHIAND 294
             A G  ++  +T  N         + WT+  L +      ++AK  ER Y +KI     
Sbjct: 238 --AGGKASMSQLTHFNGTGADRILETAWTNHELIYKNNSFDEVAKLFERWYGIKITFKEP 295

Query: 295 SLKTFRFYGNFVRREQNIQEVLEALASTEKMQYKIEERNITIY 337
            LK+ RF G+    ++ + E LE L   E   Y I+  N+ IY
Sbjct: 296 ELKSVRFTGHV--DKETLPEALEVLKLIENFNYSIKGENVYIY 336