Pairwise Alignments

Query, 337 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 372 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  136 bits (343), Expect = 7e-37
 Identities = 79/213 (37%), Positives = 121/213 (56%), Gaps = 11/213 (5%)

Query: 126 SVEAPLGSKTKLYLPDGTLVWLNAGSRMTYSQGFGVDNRKVELEGEGYFEVKRNEKIPFF 185
           +V  P G +  L LPDG+ VWLNA S + +   F  ++R+VEL+GE YFEV RN+++PF+
Sbjct: 167 TVSIPRGGQYALVLPDGSKVWLNAASSIRFPTRFTGNSREVELDGEAYFEVARNKQMPFY 226

Query: 186 VKTKDLQLQVLGTKFNFRDYPEDHEVVVSLLEGKVGLNNLLREEKEAVLSPDERAVLNKA 245
           VKT+D++L+VLGT FN   Y ++  +  +LLEGKV L +         L P E  VL   
Sbjct: 227 VKTQDMKLKVLGTHFNMMAYKDEAFIKTTLLEGKVMLTS---ASAVTYLKPGEEGVL--F 281

Query: 246 NGLLTVESVTASNASQWTDGYLFFDEELLPDIAKELERSYNVKI--HIANDSLKTFRFYG 303
               TV          W +GY  F+EE L  + +++ R Y++ I  +  N+ L     Y 
Sbjct: 282 ENKFTVNKADIEQTMAWKNGYFVFNEENLSSVMRKISRWYDIDIVYNTHNNKLS----YT 337

Query: 304 NFVRREQNIQEVLEALASTEKMQYKIEERNITI 336
             V + ++I EVL+ L+ T  +++ I ER +T+
Sbjct: 338 GSVSKFKDISEVLKVLSLTGTVKFNIAERRVTV 370