Pairwise Alignments

Query, 337 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 366 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  130 bits (327), Expect = 5e-35
 Identities = 80/231 (34%), Positives = 132/231 (57%), Gaps = 19/231 (8%)

Query: 109 ISYWQGEVNVKDTFADISVEAPLGSKTKLYLPDGTLVWLNAGSRMTYSQGFGVDN-RKVE 167
           I+  QG +++ +T A        G    + LPD + VW+NA S +TY+     +  R V+
Sbjct: 150 INETQGNLDLVNTLATAR-----GETYMVILPDKSKVWMNAASSLTYTTNLLKNGIRSVK 204

Query: 168 LEGEGYFEVKRNEKIPFFVKTKDLQLQVLGTKFNFRDYPEDHEVVVSLLEGKVGLNNLLR 227
           L GE YFEV +++  PF V+TK+ Q++VLGT FN   Y ++H V  +LLEG V +N    
Sbjct: 205 LNGEAYFEVAKDKLHPFVVETKNQQVKVLGTHFNINAYDDEHVVKTTLLEGSVEIN---- 260

Query: 228 EEKEAVLSPDERAVLNKANGLLTVESVTASNASQWTDGYLFFDEELLPDIAKELERSYNV 287
             K  +L P+++A+L   N  + V  V A +   W  G   F+ + +  I +++ R Y+V
Sbjct: 261 --KSVILKPNQQAIL--LNHEIKVIPVIADSFIDWQQGVFIFENDDMHAIMRKIARWYDV 316

Query: 288 KI--HIANDSLKTFRFYGNFVRREQNIQEVLEALASTEKMQYKIEERNITI 336
           +I  HIA D+ +TF     ++ R  +IQ+VL+ L+    +++KI++R IT+
Sbjct: 317 QIAYHIAEDNKQTF---SGYMSRSSDIQKVLQNLSEISNLKFKIKDRTITV 364