Pairwise Alignments

Query, 499 a.a., (R)-citramalate synthase (EC 2.3.1.182) (from data) from Bacteroides thetaiotaomicron VPI-5482

Subject, 540 a.a., 2-isopropylmalate synthase from Synechococcus elongatus PCC 7942

 Score =  200 bits (508), Expect = 1e-55
 Identities = 164/531 (30%), Positives = 241/531 (45%), Gaps = 57/531 (10%)

Query: 2   DTTLRDGEQTSGVSFVPHEKLMIARLLLEDLKVDRVEVASARVSEGEFEAVKMICDWAAR 61
           DTTLRDGEQ+ G S    EKL IAR L   L VD +E   A  S G+FEAV+ I      
Sbjct: 14  DTTLRDGEQSPGASLNLEEKLAIARQLAR-LNVDIIEAGFAFASPGDFEAVQRIA----- 67

Query: 62  RNLLQKVEVLGFVDGHTSVDWIQRT------GCRVINLLCKGSLK--------HCTQQLK 107
                    +G  DG T     + T          +    KG +         H   +LK
Sbjct: 68  -------AEVGTPDGPTICSLARATRQDIKAAAEALAPAAKGRIHTFIATSDIHLEYKLK 120

Query: 108 KTPEEHIADIINVVHYADEQDIGVNVYLEDWSNGMKDSPEYVFQLMDGLKQTSIRRYMLP 167
           KT  E +A I  +V YA      V    ED     +  PE++++ ++       +   +P
Sbjct: 121 KTRAEVLAVIPEMVGYAASLVDDVEFSPEDAG---RSDPEFLYECLEAAIAAGAKTINIP 177

Query: 168 DTLGILNPLQVIEYMRKMKKRYPNTH---FDFHAHNDYDLAVSNVLAAVLSGVRGLHTTI 224
           DT+G   P +    +  +K+   N        H HND  LAV+N L AV +G R L  TI
Sbjct: 178 DTVGYTTPSEFGALIGGIKQNVCNIDQAIISVHGHNDLGLAVANFLEAVKNGARQLECTI 237

Query: 225 NGLGERAGNAPLSSVQAIL---KDHFN-----------AMTNIDESRLNDVSRVVESYSG 270
           NG+GERAGNA L  +   L   + +FN            +T ++   +   SR+V + +G
Sbjct: 238 NGIGERAGNAALEELVMALHVRRQYFNPFLGRAADSEAPLTQVNTREIYKTSRLVSNLTG 297

Query: 271 IVIPANKPIVGENVFTQVAGVHADGDNKNNLYCNDLLPERFG-RKREYALGKTSGKANIR 329
           +++  NK IVG N F   +G+H DG  KN L    +  E  G       LGK SG+   R
Sbjct: 298 MLVQPNKAIVGANAFAHESGIHQDGVLKNKLTYEIVDAETIGLSTNRITLGKLSGRNAFR 357

Query: 330 KNLEDLGLELDEDAMRKVTERIIELGDKKELVTQEDLPYIVSDVLKHGAIGEKVKLKSYF 389
             L++LG +L ED + +   R  EL DKK  VT  DL  IV+D  +     E  KL+   
Sbjct: 358 TRLQELGYDLGEDDLNRAFLRFKELADKKREVTDRDLEAIVNDETQQAP--ELFKLELVQ 415

Query: 390 VNLAHGLKPMATLKIEI-NGKEYEESSSGDGQYDAFVRALRKIYKVTLGRKFPMLTNYAV 448
           V+     +P AT+ +    G+E  +++ G G  DA  RA+ ++  +        L  ++V
Sbjct: 416 VSAGDHARPTATVTLRTPEGEELTDAAIGTGPVDAIYRAINRVVNIP-----NELIEFSV 470

Query: 449 SIPPGGRTDAFVQTVITWNYDEQVFRTRGLDADQTEAAIKATMKMLNLLEE 499
                G  DA  +  I   +++++F     + D   A+ +A +  LN L E
Sbjct: 471 KSVTAG-IDAIGEVTIRLRHEDRIFSGHSANTDILVASAQAYIHALNRLAE 520