Pairwise Alignments

Query, 499 a.a., (R)-citramalate synthase (EC 2.3.1.182) (from data) from Bacteroides thetaiotaomicron VPI-5482

Subject, 542 a.a., putative alpha-isopropylmalate/homocitrate synthase family transferase from Synechococcus elongatus PCC 7942

 Score =  157 bits (396), Expect = 1e-42
 Identities = 140/523 (26%), Positives = 232/523 (44%), Gaps = 45/523 (8%)

Query: 2   DTTLRDGEQTSGVSFVPHEKLMIARLLLEDLKVDRVEVASARVSEGEFEAVKMICDWAAR 61
           DTTLRDG Q  G+S    +KL IA  L + L V  +E      +  + +       W  +
Sbjct: 13  DTTLRDGAQREGLSLSLEDKLRIAHCL-DRLGVKFIEGGWPGANPKDVQFF-----WELQ 66

Query: 62  RNLLQKVEVLGFVDGHTS---------VDWIQRTGCRVINLLCKGSLKHCTQQLKKTPEE 112
           +  LQ+ EV+ F               +  +   G   + +  K    H  + LK + +E
Sbjct: 67  QRPLQQAEVVAFCSTRRPGQIAGEDELLKALLAAGTTWVTIFGKSWDLHVVEGLKTSLDE 126

Query: 113 HIADIINVVHYADEQDIGVNVYLEDWSNGMKDSPEYVFQLMDGLKQTSIRRYMLPDTLGI 172
           ++  I + + Y    D  V    E W +G   +P+Y  Q +    +      +L DT G 
Sbjct: 127 NLVMISDSIAYLRTCDRRVIYDAEHWFDGYLANPDYALQTLAAAIEAGAEWIVLCDTNGG 186

Query: 173 LNPLQVIEYMRKMKKRYPNTHFD-------FHAHNDYDLAVSNVLAAVLSGVRGLHTTIN 225
             P Q+ E +  +  R+P+   D        H HND + AV+N +AAV +G R +H TIN
Sbjct: 187 CLPHQISEIVAAVLDRFPSLAPDQTGPQLGIHTHNDSETAVANAIAAVQAGARMVHGTIN 246

Query: 226 GLGERAGNAPLSSV--QAILKDHFNAMTNIDESRLNDVSRVVESYSGIVIPANKPIVGEN 283
           G GER GNA L SV     LK  ++ +      +L   SR+V     +    +   VG++
Sbjct: 247 GYGERCGNANLCSVIPNLQLKLGYDCVETEQLMQLTATSRLVSEIVNLAPDDHAAYVGQS 306

Query: 284 VFTQVAGVHADGDNKNNLYCNDLLPERFGRKREYALGKTSGKANIRKNLEDLGLEL--DE 341
            F    G+H     +N L    + PE+ G  R   + + SG +N+       GL+L  ++
Sbjct: 307 AFAHKGGIHVSAVERNPLTYEHIRPEQVGNLRRIVISEQSGLSNVLAKARSFGLDLQRND 366

Query: 342 DAMRKVTERIIELGDKKELVTQEDLPYIVSDVLKHGAIGEK---VKLKSYFVNLA---HG 395
            A R +  R+ EL  +       +  +   D+L   A G++     LK + V+ +     
Sbjct: 367 PACRDLLARLKELESQGYQFEAAEASF---DLLMREATGDRPHFFDLKDFHVHCSKQRQE 423

Query: 396 LKPMATLKIEINGKEYEESSSGDGQYDAFVRALRKIYKVTLGRKFPM-----LTNYAVSI 450
           L  +AT+K+ + G++  ES+ G+G   A   ALRK     +G  +P      L++Y V I
Sbjct: 424 LNALATVKVAVTGRDILESAEGNGPVSALDAALRK----AIGSFYPAVMQFHLSDYKVRI 479

Query: 451 PPGGR-TDAFVQTVITWNYDEQVFRTRGLDADQTEAAIKATMK 492
             G   T A  + ++  +   Q + T G+  +  EA+ +A ++
Sbjct: 480 LDGAAGTSAKTRVLVESSNGSQRWSTVGVSGNIIEASYQAVVE 522