Pairwise Alignments

Query, 741 a.a., cation/H+ antiporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 403 a.a., transporter, CPA2 family (TC 2.A.37) from Sphingomonas koreensis DSMZ 15582

 Score =  163 bits (412), Expect = 2e-44
 Identities = 115/408 (28%), Positives = 209/408 (51%), Gaps = 29/408 (7%)

Query: 60  LHHPLTTLLIQIIAVLLMVRLFGYLFSLIGQ----PGVIGEIVAGIVLGPSVLGLFFPEA 115
           + H +TT  I +IA+LL+  +   ++ L       P V+ +I+ GI+LGP VLG  FP+ 
Sbjct: 1   MSHAMTTTEIYLIAMLLIFSVPWLIWRLFRTDYWAPLVVVQIIGGILLGPGVLGAAFPDY 60

Query: 116 FHFLFPVHSLTNLELLSQVGLILFMFVIGMELDFSVLKNKINETLVISHAGILVPFFLGI 175
           + F+F    +  L  ++   +++F+F+ G+ELD S    K  ET + +   + VP  LG 
Sbjct: 61  YRFVFNPQVIVALNGVAWWAVMIFVFIAGLELDLSQAWTKRRETGITAGLALFVPLTLGA 120

Query: 176 LSSYWI--YETYAADHTPFLPFALFIGISMSITAFPVLARIIQERNMTKTPLGTLAIASA 233
           L++  I  +  +A          L IG+S ++TA P+L  ++++  + + P+G   +  A
Sbjct: 121 LAALAILQWPGWAGSRGESWQVVLGIGMSCAVTALPILVLLMEKMAILREPIGQRILRYA 180

Query: 234 ANDDVTAWCLLAVVIAISKAGSFASALYSVGLAVAYIAVMFLVVRPFLKKVGEV---YAN 290
           + DD+  W +LA+++   +     +A   V  A A+       VR  + ++GE    YA+
Sbjct: 181 SLDDIAIWGVLAIILLDWERVGRQAAFLLVFAAAAW------AVRRIMARIGEPDRWYAS 234

Query: 291 KEAINKTFVAFILLILIISSCLTEIIGIHALFGAFMAGVVMPSNLGFRKVMMEKVEDISL 350
                       L+ L       +  GIH + GAF+AG V+  +  F +  M+   D  L
Sbjct: 235 ------------LIWLAACGFAADWAGIHFMVGAFLAGAVLDHH-WFDQKRMDLFRDHVL 281

Query: 351 VFFLPLFFAFTGLRTEIGLINSPELWMVCLLLVTVAIVGKLGGCAIAARLVGESWKDSLT 410
              +P+FF  TGLRT+   +    ++ V  LL+ V++ GKL G  +A R++     ++  
Sbjct: 282 FAMMPVFFLSTGLRTQWD-VGGVAVFAVAGLLLVVSVAGKLAGVHLAGRVLRWQPGEAGI 340

Query: 411 VGTLMNTRGLMELVALNIGYEMGVLPPSIFVILVIMALVTTFMTTPLL 458
           +G L+ T+ L+ ++  NI  + G++    F  L++MA+ +T +T P++
Sbjct: 341 IGWLLQTKALIMIIFANILLDRGIITNETFTALLLMAVGSTMLTVPVV 388