Pairwise Alignments

Query, 741 a.a., cation/H+ antiporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 546 a.a., sodium:proton antiporter from Herbaspirillum seropedicae SmR1

 Score = 98.2 bits (243), Expect = 1e-24
 Identities = 95/418 (22%), Positives = 185/418 (44%), Gaps = 42/418 (10%)

Query: 61  HHPLTTLLIQIIAVLLMVRLFGYLFSLIGQPGVIGEIVAGIVLGPSVLGLFFPEAFHFLF 120
           HH  T L+  I+A L++  +FG L   +  P ++G +VAGI +GP   G           
Sbjct: 3   HH--TPLIATIVAGLVLAFIFGTLAHRLKMPPLVGYLVAGIAIGPFTPGF---------- 50

Query: 121 PVHSLTNLELLSQVGLILFMFVIGMELDFSVLKNKINETLVISHAGILVPFFLGILSSYW 180
            V      + L+++G+IL MF +G+      L +  N  +  + A I +   LG ++  W
Sbjct: 51  -VGDADLAQELAEIGVILLMFGVGLHFSLKDLLSVKNIAIPGAVAQITIATLLG-MALGW 108

Query: 181 IYETYAADHTPFLPFALFIGISMSITAFPVLARIIQERNMTKTPLGTLAIASAANDDVTA 240
           +      +           G+++S+ +  VL + +QER + +T  G +A+     +D+  
Sbjct: 109 LLGWPVGE-------GFLFGLALSVASTVVLLKALQERRLVETQRGRIAVGWLIVEDIAM 161

Query: 241 WCLLAVVIAIS-------KAGSFASALYSVGL----AVAYIAVMFLVVRPFLKKVGEVYA 289
              L ++ A+S       +A S  + L ++G+     VA+ AVM +V R  +  + E  A
Sbjct: 162 VLALVLIPALSGILGGKGEALSGNAVLLTLGITLGKVVAFAAVMLIVGRRVIPWILERIA 221

Query: 290 NKEAINKTFVAFILLILIISSCLTEIIGIHALFGAFMAGVVMPSNLGFRKVMMEKVEDIS 349
           +  +     +A + + L  +     + G+    GAF AG+++  +      +  +  + S
Sbjct: 222 DTGSRELFRLAVLAIALGFALGSAYVFGVSFALGAFFAGMILSES-----ELSHRAAEES 276

Query: 350 LVF---FLPLFFAFTGLRTEIGLINSPELWMVCLLLVTVAIVGKLGGCAIAARLVGESWK 406
           L     F  LFF   G+  +  ++    L  + L  V + +VGK  G  +  R  G    
Sbjct: 277 LPLRDAFSVLFFVSVGMLFDPSIVAREPL--LVLATVLIIVVGKSLGALLIVRAFGYPNG 334

Query: 407 DSLTVGTLMNTRGLMELVALNIGYEMGVLPPSIFVILVIMALVTTFMTTPLLHLVERF 464
            +LT+   +   G    +   +G  + +L P    +++  A+++  +   L  L++R+
Sbjct: 335 TALTISASLAQIGEFSFILATLGLSLDLLSPMARDLILGGAILSILLNPLLFSLLDRY 392