Pairwise Alignments

Query, 392 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 506 a.a., ATPase (AAA+ superfamily)-like protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 49.3 bits (116), Expect = 2e-10
 Identities = 61/302 (20%), Positives = 124/302 (41%), Gaps = 36/302 (11%)

Query: 32  RLIGIKGTRGVGKTTFLLQYAK---EKFGTDRSCLFINMNNFYFSGHSLVDFANEFQKRG 88
           R + + G R VGKT  L Q      ++    R  LF  ++   ++G  L DF     +  
Sbjct: 53  RAVVLMGPRRVGKTVLLHQVVDTLLQQGAERRQILFATLDAPAYTGMELADFVELAAEMA 112

Query: 89  GKV------LLIDQVFKHPEWSKELRMCYDRFPSLKIVFTGSSVMRLKE-ENLELRDIAK 141
           G        ++ D++    +W + L     R+P+L+    GS+   L+   + E      
Sbjct: 113 GLDPNRPGWVIFDEIQYMADWERGLDTLAARWPALRCTVCGSAAPALRRMGDAEAAGRFA 172

Query: 142 SYNLRGFSFREFLNLQTGMK---FRAYSLEEILSTHEQIAKGVLSKVRPLDYFQDYLHHG 198
            Y L   SF EFL L  G +    + ++ E +   +E + +              Y++ G
Sbjct: 173 VYMLPPLSFAEFLRLSGGQRRDMKQLFTPERMDELNELLVR--------------YMNFG 218

Query: 199 FYPFFLEKRNFSENLLKTMNMMVEVDILLIKQIELKY----LSKIKKLLYLLAVDGPKAP 254
            YP  +       ++ + +   + +D +L   +   Y    + ++ +LL +LA++  +  
Sbjct: 219 GYPEAVVSERVRADMARFLRSEI-IDRVLCSDLPGLYGISDVQELNRLLAVLALNSGREV 277

Query: 255 NVSQLASDVQTSRATVMNYIKYLADARLI---NLVYPKGEEFPKKPS-KIMMHNSNLMYS 310
            +  L  +   +  T+  Y+ YL  A L+     +   G  F +  S K+ + N ++  +
Sbjct: 278 TLEDLRGESGIAVNTLKRYLDYLEAAFLVVRLRRIDDAGRRFRRDRSFKVYLANPSMRTA 337

Query: 311 IY 312
           ++
Sbjct: 338 LF 339