Pairwise Alignments

Query, 1346 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1368 a.a., hybrid sensor histidine kinase/response regulator from Pedobacter sp. GW460-11-11-14-LB5

 Score =  470 bits (1209), Expect = e-136
 Identities = 352/1347 (26%), Positives = 632/1347 (46%), Gaps = 79/1347 (5%)

Query: 20   YQYLGVEDGLSNRRVYYIQKDNVGYMWFLTHEGIDRYNGKEFKRYKLMDGDKELNSLLNL 79
            ++ + VE GLS   V+ I++D +G++W  T +G++RY+ K FK Y+ +  D +       
Sbjct: 45   FRNISVEKGLSQSTVFAIKQDTLGFIWIGTQDGLNRYDSKGFKVYRPVKSDPKSVQSYYT 104

Query: 80   NWLYIDPEGTLWEIGKKGKIFRYDRIHDTFELVYKLPIEDFKDLPAPITFSWIDHNNHIW 139
              L+ID  G+LW  G +G + RY+   D+F   YKLP    +   + IT    D  ++IW
Sbjct: 105  RTLFIDHTGSLWVGGNQG-VSRYNYATDSFTN-YKLPRSLGEWYVSSITE---DPQHNIW 159

Query: 140  LCNEET-IFLYNTRTEEVTHVK-NCLSEAINDIEQID--ESHYFIGTEMGIHHAQLKNNT 195
              +    +F       +   V  +  +  I  +  +   + +  IGTE+G+       N 
Sbjct: 160  ATSVVGGVFKLTAGESQFKQVNYDSFNTGIKRVVYVGSWKQNILIGTEVGLFKMTGPKNK 219

Query: 196  LQLLPCDKLDNVNIQVNDLHFDPKIRKLFIGAFERGVMVYDMNT--KTITQPEVSLKDVS 253
            L  +    L      +ND++ D  +   ++     G++ Y   T  K +       K ++
Sbjct: 220  LVKID---LGTDKPAINDVYIDGDV--FWVATEGDGLIQYHFETGEKKVFMHSPGGKSIA 274

Query: 254  ISRI----KPLNAKELLIATDGGGIYKMNVDTYQTVPFIVADYNSYNGMNGNSINDIYID 309
             + I    K  +    L    G  I+ +N +T +     ++   +   ++ NS+   + D
Sbjct: 275  DNNIRCVGKDTDGNIWLGTFKGLTIFDLNTNTLENYYHQISQPYT---ISQNSVRCFFKD 331

Query: 310  DEERIWMANYPIGITIQNNRYPSYKWIKHSVGNKQSLINDQVNSIIEDSEGDLWYGTNN- 368
             +  IW+  +  GI   +     +  +  + G + SL ++ V++I EDS+G+ W GTN+ 
Sbjct: 332  KQNGIWLGTFYGGINYYHKNDIKFNLLSQNTG-RLSLNDEVVSAIKEDSKGNFWIGTNDK 390

Query: 369  GISLQDSKTGKWRSFLSTFENVQNS--KNHIFTTLCEVSPGIIWAGGYFSGLYQIDKRTS 426
            G++  +  T    S+ S  EN  NS   N+I     +    ++  G +  GL  ++  T 
Sbjct: 391  GLNYWNRATNNI-SYFSNNENNANSLSANNIKAIAFDNDQNLL-VGMHNGGLNILNPNTG 448

Query: 427  KTTYFTPASYAHESIRPDKYIRDIRKDSRGYVWSGGYYNLKRINVQTKDIRLYH------ 480
                +  +     SI  D  +  I KD +  +W G    L + N Q++     H      
Sbjct: 449  NVKRYRHSENDPNSIAGD-LVYGILKDYKNRIWIGTRSGLDQFNPQSQTFTHIHLDKAGK 507

Query: 481  --GLHSVTAIIEKDDKSMWIGTATGLFLLDIESGKYER-IQLPVESTYVYSLYQTKQGSL 537
                  +T + E     +WIGT  G+ L   ++  +   +   +    +  + + K+G +
Sbjct: 508  RPSSDDITYLFEDSKHRIWIGTTNGVTLFYPDNMLFGNDLNNQLRDDVISCITEDKKGRI 567

Query: 538  YIGTSGSGVLIYDPQTKLFTHYYTGNCAMISNNIYTILSDEDNEILLSTENGLTSFYPKQ 597
            +IG S  G+++YD   + F  Y       I   IY +  D +  I +ST  GL  + P+ 
Sbjct: 568  WIG-SREGLILYDENQQSFVTYKNRK-DFIKGTIYGLQPDNEGNIWVSTNRGLIRYNPEA 625

Query: 598  KTFYNWTKEMGLMTTHFNALSGTLRRNNNFIFGSSDGAIEFNKDMKLPRTYSSKMIFSDF 657
            KT   + +  GL    FN  +     +   +FG   G   F       +    K+ F+  
Sbjct: 626  KTSQAFDETDGLQNNQFNDYAFCKASDGMLLFGGIKGLSYFYPSSIKQQPLPLKLTFTGL 685

Query: 658  KLFYQTVYPGDKNSPLEKDINETKELRLKYNQNIFSLMVSSINYDYPSNVLYSWKLEEFY 717
            ++F  +V  GD+   LE  I+++ +L        F++  ++ NY   +   Y +KL+ F 
Sbjct: 686  EVFNNSVTSGDETKILENHIDQSTQLEFAAEYKQFTIHFNTFNYISANRTKYLYKLDGFD 745

Query: 718  EEWSKPGNESTIRYTNLAPGKYVLRVRAISNEDQRVMLEERSIDIIIAQPFWLTPW---- 773
            ++W     +  I Y NL  G Y   ++A+    +   +  R++ III+ P++   W    
Sbjct: 746  KDWQHT-EDLKITYNNLRAGSYNFLIKAVGPNGEASAV--RTLKIIISPPWYNATWFYLF 802

Query: 774  --------AMILYAIL---ISLIAVIILRVLILKKQRKVSDEKIHFFINTAHDIRTPLTL 822
                    + I Y I+   I  +  + L  +  +K R ++  K+ FF N +H++RTPLTL
Sbjct: 803  VFIDLVGASYIAYRIIDQRIKALHQLKLERIDKEKVRYINQVKMDFFTNVSHELRTPLTL 862

Query: 823  IKAPLEDLREKEALSKEGIANMNTAIRNVNALLRLTTNLINFERADVYSSELYISEHELN 882
            I APLE+L +K +  K         + N   L  L   L  F + +  + +L +S+ ++ 
Sbjct: 863  ILAPLEELIKKPSTDKVITKRHEMMLINAKRLYNLVDQLFEFRKTETGTRKLKVSKSDIV 922

Query: 883  TFMTEIFNAFQPYANIKHINFTYESNFRYMNVWFDKEKMESILKNIISNALKYTPENGNV 942
            +F+ E++ +F+P ++   + +TY S+   ++ +FD + ME IL N++SNA KYT  +  +
Sbjct: 923  SFIHEVYESFKPLSDKNQVQYTYHSSEAKLSFYFDNDAMEKILFNLLSNAFKYTGAHNKI 982

Query: 943  QIFVSENNDSWSVEVKDTGIGIPASEQKKLFKLHFRGSNAINSKVTGSGIGLMLVWKLVR 1002
             + +S  ++   + V DTG+GI   +  K+F   ++ +N       GSG+GL    +L+ 
Sbjct: 983  SVELSTQDNFAIITVTDTGVGISEDDIAKVFDRFYQVNN--QEMNLGSGVGLAFTKRLIE 1040

Query: 1003 LHKGKINLSSVENQGSVIKISFPKDSKRFHKAHLATPSKRRQEITSTTNVPASIYENVH- 1061
            LH G I   S   +GS   +S P     + +         R E++      A    N+  
Sbjct: 1041 LHHGSIKAESELGRGSKFTVSIPMADAVYQED--VKTENMRYELSIVPEEEAIAENNLMY 1098

Query: 1062 ---------KEQNPNHQRILIVEDNDELRNYLSQTLAEEYTVQNCCNGKEALTIIPEYKP 1112
                      E +    ++L+V+DN E+ +YL     E Y +    +GK AL I+   + 
Sbjct: 1099 ADQSLTIGLNENDGQRSKLLLVDDNKEILDYLQDYFKESYEITIAFDGKMALDILENEQF 1158

Query: 1113 ELVISDIMMPEMRGDELCDAIKNNIETSHIPVILLTALNNEKDILSGLQIGADEYIVKPF 1172
            +L++SD+MMPE+ G   C  +K NI TSHIPVILLTA       + GL++GAD+YI KPF
Sbjct: 1159 DLIVSDVMMPELDGLHFCKRLKQNINTSHIPVILLTAKTEVNQQIKGLEMGADDYITKPF 1218

Query: 1173 NIGILKATVSNLLINRALLRSKYGSLDMDDEDDHEDECINCSQDIDWKFIANVRKNIEDN 1232
            ++ +L A +++LL +R  L+  YG      E   ++   N    +D +F+      +E  
Sbjct: 1219 SVEMLGAKIASLLKSRKRLKEYYGG---SKEVVPQNLAFN---TLDEEFLKEAIAIVEKY 1272

Query: 1233 IDNPALTVDVLCNLMGMSRTSFYNKLRALTDQAPGDYIRLIRLKRSVKLLKEGTHSITEI 1292
            + +   +VD     +GMSR++ Y K +A+T ++  D+I+ IR  ++V+L++   ++I +I
Sbjct: 1273 LADSDFSVDKFSREIGMSRSNLYLKFKAITGESATDFIKRIRFSKAVELMQSKRYTIAQI 1332

Query: 1293 AEMTGFSDAKYFREVFKKHFNVSPSQY 1319
              M GF+   YF   FK+++   PS+Y
Sbjct: 1333 TYMCGFNSPSYFSTAFKQYYGCMPSEY 1359