Pairwise Alignments

Query, 1346 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1365 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  485 bits (1248), Expect = e-140
 Identities = 386/1380 (27%), Positives = 650/1380 (47%), Gaps = 96/1380 (6%)

Query: 4    WLFLLLLFPLTCVAQ---TYQYLGVEDGLSNRRVYYIQKDNVGYMWFLTHEGIDRYNGKE 60
            W F +L    T  AQ    + +L +E+GLS   V  I +D   ++W  T  G++RY+G  
Sbjct: 9    WFFPMLFICTTLCAQKHLVFNHLRMENGLSQNSVMAITQDKNQFIWMGTRHGLNRYDGYR 68

Query: 61   FKRYKLMDGDKELNSLLN--LNWLYIDPEGTLWEIGKKGKIFRYDRIHDTFELVYKLPIE 118
            FK Y   +    LNSL +  +N L  D +G LW +G +  +  Y+  +D F  + K    
Sbjct: 69   FKIYN--NSSDNLNSLSDNVINTLLSDSKGRLW-VGTENGLNIYNDKNDHFYRINKRSSA 125

Query: 119  DFKDLPAPITFSWIDHNNHIWLCNEETIFLYNTRTEEVTHV----KNCLSEAINDIEQI- 173
            +     + +   + D   +IW+     + L     +++       K     A+N I  I 
Sbjct: 126  NSFSCDS-VECIYEDPQKNIWVGTYNGLNLVIDTEKQIFKKFLFDKPNYKSALNCIFSIF 184

Query: 174  --DESHYFIGTEMGI----------HHAQLKNNTLQLLPCDKLDNVNIQVNDLHFDPKIR 221
              ++ + ++GT  G+          H    ++N     P +K    +  V  +  D K +
Sbjct: 185  KDEKQNLWVGTYNGLVRIYQVKGKYHFEIFRHN-----PNNKNSISSNAVKSIVID-KQK 238

Query: 222  KLFIGAFERGVMVYDMNTKTITQPEVSLKDVS------ISRIKPLNAKELLIATDGG-GI 274
            +L++G +  G+ ++D   KT  + + S  D +      I ++       + I T  G  I
Sbjct: 239  RLWLGTYN-GLNLFDYEHKTFKRYQTSATDPNSIINNDIRKLTRDKVGNIWIGTQEGLSI 297

Query: 275  YKMNVDTYQTVPFIVADYNSYNGMNGNSINDIYIDDEERIWMANYPIGITIQNNRYPSYK 334
               N   +    +   D    +G++ NSI+ I+ D    +++  Y  G  +       + 
Sbjct: 298  LDPNTRKFSNYRY---DPEQPDGLSQNSIHSIFQDLNGSVYLGTYYKGANVVYPSATPFT 354

Query: 335  WIKHSVGNKQSLINDQVNSIIEDSEGDLWYGTNNGISLQDSKTGKWRSFLSTFENVQNSK 394
              ++S   +Q L +D V++++ED   +LW GT  G     +++    ++     N  N  
Sbjct: 355  VFRNSK-TRQGLSSDIVSAMVEDQNHNLWIGTEGGGLNYVNRSNHTFTYYKLEPNSNNGL 413

Query: 395  N-HIFTTLCEVSPGIIWAGGYFSGLYQIDKRTSKTTYFTPASYAHESIRPDKYIRDIRKD 453
            N ++  TLC    G +  G +  GLY  +                 +    + I  I +D
Sbjct: 414  NSNLIKTLCLDKTGQLLVGTHRGGLYLFNAAGHNFKKIINVKNKKNNPGGSEVIA-ITED 472

Query: 454  SRGYVWSG---GYYNLKRIN----VQTKDIRLYHGLHS--VTAIIEKDDKSMWIGTATGL 504
            S G VW G   G   LK+ N      T    L   L +  +  I E   K++WIGT  GL
Sbjct: 473  SDGTVWVGSRDGLSTLKKTNGLYAATTVKSPLEQNLRNKYIQVIFEDKAKNLWIGTMAGL 532

Query: 505  FLLDIESGK----YERIQLP--VESTYVYSLYQTKQGSLYIGTSGSGVLIYDPQTKLFTH 558
            +     + +    Y+    P  + S ++  + Q + G++ +GTS  G+ I+D +++ F +
Sbjct: 533  YAYHPATKRITAYYKNKTKPGSLNSDHINCIVQIQNGNICVGTSFGGLSIFDNKSRKFKN 592

Query: 559  YYTGNCAMISNNIYTILSDEDNEILLSTENGLTSFYPKQKTFYNWTKEMGLMTTHFNALS 618
            Y   +  + ++N+  I+ DE+N + +ST+ GL+    K   F N+TK  GL    FN  S
Sbjct: 593  YNEKD-GLPNSNVLGIIEDEENNLWISTDKGLSKLITKTGRFINYTKSDGLAGNDFNIRS 651

Query: 619  GTLRRNNNFIFGSSDGAIEFNK---DMKLPRTYSSKMIFSDFKLFYQTVYPGDKNSPLEK 675
                      FG  DG   F     D+   R  +  + F++ KLF + V     +  L +
Sbjct: 652  FLKDSRGELFFGGYDGLTAFYPSQIDINSNRNVAP-ITFTELKLFDKPVAVNAPDGLLNE 710

Query: 676  DINETKELRLKYNQNIFSLMVSSINYDYPSNVLYSWKLEEFYEEWSKPGNESTIRYTNLA 735
            DI   K++  K++ N FSL  + +NY  P    Y + L+   ++W K    S + Y++L 
Sbjct: 711  DIKSIKQITFKHDNNNFSLDFALLNYIKPEKNSYRYILKGHSKDWVKTDVPS-VTYSDLP 769

Query: 736  PGKYVLRVRAISNEDQRVMLEERSIDIIIAQPFWLTPWAMILYAILISLIAVIILRVL-- 793
             G Y   V   +N D     +  S+ I +  PFW T WA ++Y    S +  +I+R L  
Sbjct: 770  AGNYTFIVTG-NNNDGNPGNKPASLKITVLPPFWATWWAYLIYLACFSGLLFLIVRYLFV 828

Query: 794  --ILKKQRKVSDEKIHFFINTAHDIRTPLTLIKAPLEDLREKEALSKEGIANMNTAIRNV 851
              +LK+   +   K++FF   AH+IRTPLTLI  PLE+L ++     E    +     N 
Sbjct: 829  RALLKRTEDIQKMKLNFFTYVAHEIRTPLTLILGPLENLSKQYQTDTELNRQIIPIKNNA 888

Query: 852  NALLRLTTNLINFERADVYSSELYISEHELNTFMTEIFNAFQPYANIKHINFTYESNFRY 911
            N L+RL T L++F +A+     L+++E  +  F+ EIF +F   A    I + +      
Sbjct: 889  NRLMRLITELMDFRKAETGHLTLHVTEDNIVDFINEIFISFSHLAQTNDIQYEFVRGQEN 948

Query: 912  MNVWFDKEKMESILKNIISNALKYTPENGNVQIFVSENNDSWSVEVKDTGIGIPASEQKK 971
            ++++FDK ++E +L N++SNA K+  + G + + + + ++  ++ + D G+GIPA   K 
Sbjct: 949  ISLFFDKRQLEKVLFNLLSNAFKFCDKGGKISVTLVDMDNEVAISIADNGLGIPAESLKN 1008

Query: 972  LFKLHFRGSNAINSKVTGSGIGLMLVWKLVRLHKGKINLSSV-----ENQGSVIKISFPK 1026
            LF  +F+     ++++ GSGIGL L   +V  HKG I + S      E   +   +   K
Sbjct: 1009 LFSDYFQVDEQHSNQI-GSGIGLALSKAIVEEHKGHIAVESTPAENGERGFTNFTVRLKK 1067

Query: 1027 DSKRFH-------KAHLATPSKRRQEITSTTNVPASIYENVHKEQNPNHQRILIVEDNDE 1079
                F        K +   P+   Q+     N+         KE + + + IL+VEDN E
Sbjct: 1068 GKSHFKTAIFDGAKDYPTHPNIYTQQPEKELNI-----LKPEKETDLSTETILVVEDNSE 1122

Query: 1080 LRNYLSQTLAEEYTVQNCCNGKEALTIIPEYKPELVISDIMMPEMRGDELCDAIKNNIET 1139
            +R  ++  +   Y V    NG        E  P+L+I DIMMP M G ELC  +K +  T
Sbjct: 1123 IRQLIASLIGGHYLVAESENGLMGWETAVETLPDLIICDIMMPIMDGIELCRRLKEDERT 1182

Query: 1140 SHIPVILLTALNNEKDILSGLQIGADEYIVKPFNIGILKATVSNLLINRALLRSKYGSLD 1199
            SHIPVI+LTA ++    +SGL+ GAD YI KPF+  +L   V NLL++R ++R K+    
Sbjct: 1183 SHIPVIILTARSSHIHQVSGLETGADAYITKPFSPELLLLNVRNLLMSRQVMRQKFLK-- 1240

Query: 1200 MDDEDDHEDECINCSQDIDWKFIANVRKNIEDNIDNPALTVDVLCNLMGMSRTSFYNKLR 1259
                   ++  IN    ID  F+  + K I+++I +    V  L +++GMSR   Y K+R
Sbjct: 1241 -HIHLQPKELTINA---IDEAFMLKLLKYIDEHITDEDFGVSELASMVGMSRPVLYKKIR 1296

Query: 1260 ALTDQAPGDYIRLIRLKRSVKLLKEGTHSITEIAEMTGFSDAKYFREVFKKHFNVSPSQY 1319
             LT+ +  D+++ IRLK++++L K+   +I E+A   GF+D KYF   FKK F  SP  +
Sbjct: 1297 NLTNLSVNDFVKSIRLKKAMELFKQNRFTIYEVAYQVGFNDPKYFSREFKKQFGKSPRAF 1356