Pairwise Alignments

Query, 1346 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1349 a.a., hybrid sensor histidine kinase/response regulator from Pedobacter sp. GW460-11-11-14-LB5

 Score =  543 bits (1398), Expect = e-158
 Identities = 396/1363 (29%), Positives = 664/1363 (48%), Gaps = 89/1363 (6%)

Query: 19   TYQYLGVEDGLSNRRVYYIQKDNVGYMWFLTHEGIDRYNGKEFKRYKLMDGDKELNSLLN 78
            ++ +L V +GLS   V  I KD+ GYMWF T + ++RY+GK  K Y+  D D    S+  
Sbjct: 9    SFDHLSVNNGLSQSTVLSICKDSRGYMWFGTRDCLNRYDGKSVKIYRT-DPDNPA-SIST 66

Query: 79   LNWLYI---DPEGTLWEIGKKGKIFRYDRIHDTFELVYKLPIEDFKDLPAPITFSWIDHN 135
             +++Y    D +  LW IG +  + RY    D FE +   P          I   + D +
Sbjct: 67   EDYIYALEEDRQKNLW-IGTQNGLNRYIPEKDAFERIAFDPKNANSISDKIILSIYADRS 125

Query: 136  NHIWLCNEETIFLYNT----RTEEVTHVKNCLSEAINDIEQIDESHYFIGTEMGIHHAQL 191
              +W    + + +       + +++         ++  I +  + + ++GT  G+     
Sbjct: 126  GKVWFGTNQGLSMLENGSSRKFKKIYQKDGLAGNSVYTIFEDSKGNIWVGTTTGLSRLSF 185

Query: 192  KNNT--LQLLPCDKLDNVNIQVNDLHFDPKIRK--LFIGAFERGVMVYDMNTKTIT---- 243
            K     +Q       D  +I  N +    +  K  ++IG+   G+ ++   + +      
Sbjct: 186  KEGKYHIQSFYHRAGDPGSISGNSIRTIAEDGKGRIWIGSESEGLNLFLPQSHSFKRFRY 245

Query: 244  ---QPEVSLKDVSISRIKPLNAKELLIATDGGGIYKMNVDTYQTVPFIVADYNSYN--GM 298
               QP     D+ + +I P     L IAT  G    +N+   QT+ F    +++ N   +
Sbjct: 246  SALQPNALSNDI-VRKIMPDGKGNLWIATMNG----LNILDTQTLGFTSYKHDADNRKSL 300

Query: 299  NGNSINDIYIDDEERIWMANYPIGITIQNNRYPSYKWIKHSVGNKQSLINDQVNSIIEDS 358
            + NSI +I+ DD+  IW+     G+ + +     +   K+S   + S+ +D  + I  D+
Sbjct: 301  SDNSIKEIFQDDQGSIWIGTMFGGVNVAHRNTIPFTVFKYSK-YRNSISSDISSVIAADN 359

Query: 359  EGDLWYGTNN-GISLQDSKTGKWRSFLSTFENVQNSKNHIFTTLCEVSPGIIWAGGYFSG 417
            + +LW GT   G++  + KTG ++ +++   +  +  N+    +     G IW G Y  G
Sbjct: 360  DQNLWIGTEGQGLNFYNVKTGLFKKYINDPRDPGSLSNNTIKAIFNDRKGRIWIGLYQGG 419

Query: 418  LYQIDKRTSKTTYFTPASYAHESIRPDKYIRDIRKDSRGYVWSG------GYYNLKRINV 471
            L      T K  ++ P            Y+  I +D +G +  G        ++ ++ + 
Sbjct: 420  LELFIPSTGKFKHYPPGRNGLSQ----GYLSSISEDDQGRLLLGTSSKGLNIFDPEKESF 475

Query: 472  QTKDIRLYHGLHSVTAII----EKDDKSMWIGTATGLFLLDIESGKY------ERIQLPV 521
            Q  D +  HGL   ++ I    +   K++W+GT  GL  L   +  +      ++ +  +
Sbjct: 476  QLIDDQPGHGLKLSSSYIRFAYQDTKKNLWVGTPRGLNFLPPGANHFSVFSRDDKTKGSL 535

Query: 522  ESTYVYSLYQTKQGSLYIGTSGSGVLIYDPQTKLFTHYYTGNCAMISNNIYTILSDEDNE 581
            +S+ +  L++ + G +++GT   G+ +Y P +K F+ Y T    + S+NI  +L D D  
Sbjct: 536  KSSQITCLWEDRLGHIWVGTMRGGLSLYHPDSKSFSTY-TRAQGLASDNIIDVLDDNDGN 594

Query: 582  ILLSTENGLTSFYPKQKTFYNWTKEMGLMTTHFNALSGTLRRNNNFIFGSSDGAIEFNKD 641
            + +ST+ GL+ F  K+  F N+    GL T  FN  S     +    FGS DG + F   
Sbjct: 595  LWISTDRGLSKFDYKRGVFKNYNTGDGLPTNEFNVNSAYRDIHGKLYFGSYDGLVVFTPR 654

Query: 642  MKLPRTYSSKMIFSDFKLFYQTVYPGDKNSPLEKDINETKELRLKYNQNIFSLMVSSINY 701
                 T   + +FS  KLF + V   + N  L++DI+ TK +     QNIFSL   S+NY
Sbjct: 655  EITENTLIPRTVFSGLKLFNKPVGINEDNGLLKQDISFTKGITFTAEQNIFSLEFVSLNY 714

Query: 702  DYPSNVLYSWKLEEFYEEWSKPGNESTIRYTNLAPGKYVLRVRAISNEDQRVMLEERSID 761
              P    Y++KLE F ++W+     S   YTNL  G Y L V+  SN D         ++
Sbjct: 715  VQPQRNRYAYKLEGFEKDWNYVTIPSA-SYTNLPSGNYKLLVKG-SNNDGLWSKAPVVME 772

Query: 762  IIIAQPFWLTPWAMILYAILISLIAVIILRVLILKKQRKVSDE----------------- 804
            I +  P W T WA  LY I   L+   +LR    ++Q+K+  E                 
Sbjct: 773  IRVLPPLWQTWWAYTLYFIAGGLLLYFVLR--FTRRQQKLKTELYYEHLNSERQSELYQM 830

Query: 805  KIHFFINTAHDIRTPLTLIKAPLEDLREKEALSKEGIANMNTAIRNVNALLRLTTNLINF 864
            K+ FF   +H+IRTPLTLI APLE L +  A +      +    RN + L+RL + L++F
Sbjct: 831  KLDFFTRISHEIRTPLTLIFAPLEKLIKITAENGAVNLQLQNIKRNTDRLVRLISELLDF 890

Query: 865  ERADVYSSELYISEHELNTFMTEIFNAFQPYANIKHINFTYESNFRYMNVWFDKEKMESI 924
             + +  +  L +SE++L +F  +I+ ++   A IK+I++ +E     M V++D  +ME +
Sbjct: 891  RKIESGNLSLKVSENDLVSFCRQIYESYLGLAEIKNIDYRFECEAESMLVYYDPAQMEKV 950

Query: 925  LKNIISNALKYTPENGNVQIFVSENNDSWSVEVKDTGIGIPASEQKKLFKLHFRGSNAIN 984
              NI+SNA K+TP+NG +   + +++    + + DTGIGIPA  Q K+F   F+  N   
Sbjct: 951  FYNILSNAFKFTPDNGKITFSLKQSDGLAKIAITDTGIGIPADLQDKIFTNFFQVKNGA- 1009

Query: 985  SKVTGSGIGLMLVWKLVRLHKGKINLSSVENQGSVIKISFPKDSKRFHKAHLATPSKRRQ 1044
            +   G GIGL L   ++ LHKG++N+ S         I+    S    K H +       
Sbjct: 1010 AATEGWGIGLALAKNILDLHKGEVNVYSEPANNKRQGITILHVSLLLGKNHFSDEQIASN 1069

Query: 1045 EITSTTNVPASIYENVHK--------EQNPNHQRILIVEDNDELRNYLSQTLAEEYTVQN 1096
             I   T+ P ++    H+         ++     +L+VEDNDELR+++ Q+L   Y +  
Sbjct: 1070 PIV--TDKPVAVGSLDHELAKIQLVAPEDKKRHTVLVVEDNDELRDFIVQSLKHTYHILE 1127

Query: 1097 CCNGKEALTIIPEYKPELVISDIMMPEMRGDELCDAIKNNIETSHIPVILLTALNNEKDI 1156
              NG     +  E+ P++V+SD+ MPE+ G ELC  +K    T+HIPVI+LTA+ +    
Sbjct: 1128 GKNGLVGWEVATEHVPDIVVSDVTMPELNGFELCQRLKQEETTNHIPVIMLTAMASHVHQ 1187

Query: 1157 LSGLQIGADEYIVKPFNIGILKATVSNLLINRALLRSKYGSLDMDDEDDHEDECINCSQD 1216
            + GL+ GAD YI KPF+I +L+ ++ NLL  R  LR KY    M +    E      +  
Sbjct: 1188 IDGLEAGADVYITKPFSIQVLELSIRNLLQGREELRQKYIKQIMLNPRKLE------TAS 1241

Query: 1217 IDWKFIANVRKNIEDNIDNPALTVDVLCNLMGMSRTSFYNKLRALTDQAPGDYIRLIRLK 1276
             + KF+  + + IED +++P   V  L + +GMS+T  Y K++ALT  +  D+I+  RLK
Sbjct: 1242 PEEKFLNRLMQLIEDGMEDPEFNVGGLVDQIGMSQTVLYKKIKALTGLSISDFIKSQRLK 1301

Query: 1277 RSVKLLKEGTHSITEIAEMTGFSDAKYFREVFKKHFNVSPSQY 1319
            R+ +LL +   +I E+A   GF+D KYF + F+K F V+PS+Y
Sbjct: 1302 RAAQLLNDHKMNIAEVAYSVGFNDRKYFSKEFRKQFGVAPSEY 1344