Pairwise Alignments

Query, 1346 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1347 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  485 bits (1249), Expect = e-140
 Identities = 371/1364 (27%), Positives = 655/1364 (48%), Gaps = 87/1364 (6%)

Query: 4    WLFLLLLFPLTCVAQT----YQYLGVEDGLSNRRVYYIQKDNVGYMWFLTHEGIDRYNGK 59
            ++F L +    C AQ+     +YLGVE GLSN  V  +  D+ G+MW  T++G++RY+G 
Sbjct: 11   FIFFLWMGTGICFAQSTAIPLKYLGVESGLSNNVVNSLYLDHFGFMWMGTYDGLNRYDGY 70

Query: 60   EFKRYKLMDGDKELNSLLN--LNWLYIDPEGTLWEIGKKGKIFRYDRIHDTFELVYKLPI 117
             FK ++   GD+  +SL+N  +  L  D +  +W +G +  I  YD     F  +  L  
Sbjct: 71   HFKVFRNGWGDE--HSLVNNHITVLNGDAKNRVW-VGTQKGISYYDYADSRFHQLIYLDK 127

Query: 118  EDFKDLPAPITFSWIDHNNHIWLCNEET-IFLYNTRT---EEVTHVKNCLSEAINDIEQI 173
                ++   I    I     +++  EE  +F+    +   E +   KN            
Sbjct: 128  GRKNEVSYAINSIAISQALAVYVATEEKGLFMLKKNSSLAERIPFGKNFDFTVKALYIDD 187

Query: 174  DESHYFIGTEMGIHHAQLKNNTLQLLPCDKLDNVNIQVNDLHFDPKIRKLFIGAFERGVM 233
            D++ +    ++G+       N ++L+    L +V     D       + L++G  ERG+ 
Sbjct: 188  DQTLWLFIKDVGLCKYDKDQNKVRLVTA-ALSSVTCITKDTK-----QTLWLGT-ERGLF 240

Query: 234  VYDMNTKTITQPEVSLKDVSISRIKPLNAKELLIATDGGGIYKMNVDTYQTVPFIVADYN 293
             +D    +I++    L + +I  +     ++L I+TDGGG+     DT +     ++   
Sbjct: 241  QFDKVKASISKFNQHLNNENIMGLLLDRQQKLWISTDGGGVAVY--DTKKQKTSYLSAGK 298

Query: 294  SYNGMNGNSINDIYIDDEERIWMANYPIGITIQNNRYPSYKWIKHSVGNKQSLINDQVNS 353
                ++ NS+  +Y D E R W+A    G+ I +     +  IKH      SLIN+ V S
Sbjct: 299  EKGLLSSNSVAQVYEDHESRKWIATLRGGVNIIDTENEQFTTIKHDPLKSNSLINNFVLS 358

Query: 354  IIEDSEGDLWYGTNNG-ISLQDSKTGKWRSFLSTFENVQNSKNHIFTTLCEVSPGIIWAG 412
              ED   ++W GT+ G +S+ + K   + ++  T +    + N + + L +    + W  
Sbjct: 359  FSEDENKNIWIGTDGGGLSVWNRKLNTFANYAKTSDPNSLTSNFVTSILNDADHNV-WVA 417

Query: 413  GYFSGLYQIDKRTSKTTYFTPASYAHESIRPDKYIRDIRKDSRGYVWSGGYYN--LKRIN 470
             +  G+ + +K T K  ++    Y       D  I  + +D +  +W G      L R N
Sbjct: 418  SFSGGIDRFNKTTGKFVHYN--CYNTSKGVDDINIWKLYQDKQQNIWVGTTKGGALYRYN 475

Query: 471  VQTKDIRLYHG-LHSVTAIIEKDDKSMWIGTATGLFLLDIESGKYERIQLPVESTYVYSL 529
                   L+   L  + ++ +     +W G  T L  +D  + K+   ++   +  + ++
Sbjct: 476  KSIDKFELFDTKLKDIHSLFQDSKGRLWAGNYTELIEIDPVNKKHNYTKI---NFAIRAI 532

Query: 530  YQTKQGSLYIGTSGSGVLIYDPQTKLFTHYYTGNCAMISNNIYTILSDEDNEILLSTENG 589
             +     ++IGT G G+L++DP+TK    Y   +  + SN++  IL D    +  ST NG
Sbjct: 533  QEDFNHQIWIGTEGGGLLLFDPETKKIKRYIQSD-GLPSNSVLNILQDAQGNLWCSTYNG 591

Query: 590  LTSFYPKQKTFYNWTKEMGLMTTHFNALSGTLRRNNNFIFGSSDGAIEFNKDMKLPRTYS 649
            L+ F  +  +F N+    GL +  FN  +     N NF+FG   G   F+ D        
Sbjct: 592  LSRFDVRHHSFKNYYATDGLQSNQFNYNAALKLANGNFLFGGIGGFNLFSPDSIKKNKRI 651

Query: 650  SKMIFSDFKLFYQTVYPGDKNSPLEKD-------INETKELRLKYNQNIFSLMVSSINYD 702
             KM+ +DF++          N PL++D       +     + + ++  + S+  ++I + 
Sbjct: 652  PKMVLTDFRI---------NNIPLDQDSAYNDISVINLARIEIPFSDAVISIDYAAIEFS 702

Query: 703  YPSNVLYSWKLEEFYEEWSKPGNESTIRYTNLAPGKYVLRVRAISNEDQRVMLEERSIDI 762
            +   + Y++ LE +  +W+     ST  Y+ L  G+Y L +++   E       E+ + I
Sbjct: 703  FQDQISYAYYLEGWDRDWNYVNKLSTAYYSRLNEGEYKLHIKSTDTEGAWSN-NEKIVVI 761

Query: 763  IIAQPFWLTPWAMILYAILISLIAVII---------------LRVLILKKQRKVSDEKIH 807
             I  P++ T WA  +Y I+ S I  +                +  L +++++ ++++K++
Sbjct: 762  RILPPWYRTWWAYTIYLIIGSSIFYLFQTYRNRQRRLKHEVEITNLKMEREKDLNEKKLN 821

Query: 808  FFINTAHDIRTPLTLIKAPLEDLREKEALSKEGIANMNTAIRNVNALLRLTTNLINFERA 867
            FF N +H++RTPLTLI  P++D+  K+    E   ++N   RN   LL L   L+ F + 
Sbjct: 822  FFTNISHELRTPLTLIVNPIKDIILKKDPGPEK-NDLNIVYRNSRRLLSLVDQLLLFRKT 880

Query: 868  DVYSSELYISEHELNTFMTEIFNAFQPYANIKHINFTYESNFRYMNVWFDKEKMESILKN 927
            +  +  L I    L  F  EIF  F   A   HI++T+E     ++++ DK+K+E +  N
Sbjct: 881  ESENDTLKIVRINLYKFTNEIFLCFNYLAKQNHIDYTFECEEEELDIYADKDKLEIVFFN 940

Query: 928  IISNALKYTPENGNVQIFVSENNDSWSVEVKDTGIGIPASEQKKLFKLHFRGSNAINSKV 987
            ++SNALK+TP+ G V+  V        +EV D+G GIPA   +KLF   ++  +  + K+
Sbjct: 941  LLSNALKFTPKGGFVKFSVKPLGMRVQIEVSDSGPGIPAHVGEKLFDKFYKVMSNESLKM 1000

Query: 988  TGSGIGLMLVWKLVRLHKGKINLSSVENQGSVIKISFPKDSKRFHKAHLATPSKRRQEIT 1047
             G GIGL L    V LHKGKI+  S +  G++  I  P        + +      + E+T
Sbjct: 1001 -GFGIGLYLAKNFVELHKGKISFRSNQGMGTIFLIDIPVGEPNLQHSGVF-----QNELT 1054

Query: 1048 STTNVPASIYE--NVHKEQNPNHQ-------RILIVEDNDELRNYLSQTLAEEYTVQNCC 1098
                + A   E  N   E   N Q        IL+++DN E+ +Y+     E + +    
Sbjct: 1055 YVNELIAQEEEAENNDTEHVGNLQLLISDLHSILVIDDNPEIIDYIRHIFQENFKIYKAE 1114

Query: 1099 NGKEALTIIPEYKPELVISDIMMPEMRGDELCDAIKNNIETSHIPVILLTALNNEKDILS 1158
            NG + L    EY P++VISD+ M  + G ELC AIK++   SHIPVILLT   + +  L 
Sbjct: 1115 NGTDGLKRCKEYLPDIVISDVNMDGLNGIELCKAIKDDSALSHIPVILLTGDPSPEVKLK 1174

Query: 1159 GLQIGADEYIVKPFNIGILKATVSNLLINRALLRSKYGSLDMDDEDDHEDECINCSQDID 1218
            G+++GA ++I KPF+  +  A +++++ NR  L+S + +      D H+      SQ+ D
Sbjct: 1175 GIEVGAYDFISKPFDRELFTAKINSIIKNRTNLQSYFYNEITLKSDAHK-----VSQE-D 1228

Query: 1219 WKFIANVRKNIEDNIDNPALTVDVLCNLMGMSRTSFYNKLRALTDQAPGDYIRLIRLKRS 1278
              F+      IE+N+   +  V +L + +GMS ++ Y +++A + Q+   +IR IRL+++
Sbjct: 1229 KGFLQKCIMIIEENLMEDSFNVKILASDLGMSHSNLYKRIKATSGQSVNGFIRFIRLRKA 1288

Query: 1279 VKLLKEGTHSITEIAEMTGFSDAKYFREVFKKHFNVSPSQYGKE 1322
             +LL     +I E A   G +D+KYFRE F+K F ++PS++ K+
Sbjct: 1289 AELLINTNLNINEAAFRVGINDSKYFREQFQKLFKLTPSEFIKK 1332