Pairwise Alignments

Query, 1346 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1347 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  505 bits (1300), Expect = e-146
 Identities = 375/1375 (27%), Positives = 673/1375 (48%), Gaps = 101/1375 (7%)

Query: 5    LFLLLLFPLTCVAQTYQYLGVEDGLSNRRVYYIQKDNVGYMWFLTHEGIDRYNGKEFKRY 64
            + L++ F        + +LG+E GLSN  V  I KD+ G+MWF T +G+++YNG  F+ Y
Sbjct: 12   IILIIRFTDLHAQDLFSHLGIEKGLSNNSVNAIYKDHFGFMWFGTDDGLNQYNGYSFRIY 71

Query: 65   KLMDGDKELNSLLNLNWLYI--DPEGTLWEIGKKGKIFRYDRIHDTFELVYKLPIEDFKD 122
            +    D   +SL+N   + +  D  GTLW   K+G    +       + ++K    D K 
Sbjct: 72   RNNPNDS--SSLVNNQVIGMAEDGSGTLWIATKRGVSVLHSFPSKFVKPIFKA-YNDKKA 128

Query: 123  LPAPITFSWIDHNNH--IWL-CNEETIFLYNTRTEEVTHV------KNCLSEAINDIEQI 173
             P       I   NH  +++  ++  + +Y+  + E   V      K     +I  I  +
Sbjct: 129  RPIDQEIYAIKGGNHGDVFIGASDLGLLVYDNHSRETRQVSFQPGEKVLTPYSIRAIRPV 188

Query: 174  DESHYFIGTEMGIHHAQLKNNTLQLLPCDKLDNVNIQ-VNDLHFDPKIRKLFIGAFERGV 232
             +  + I    G+ +   ++  + L+      N +I+  N +  D     L+IG  + G+
Sbjct: 189  QDRAWLINPAKGLAYYDYRSKQISLVS----SNGDIRNANSIEADQS-GNLWIGT-DHGL 242

Query: 233  MVYDMNTKTITQPEVSLKDVSISRIKPL---NAKELLIATDGGGIYKMNVD----TYQTV 285
              Y++  K+     V+   +   RI  L       LLIATDGGGI  M+ +    +YQT 
Sbjct: 243  YRYNILAKSFKWYSVAPGQLLAQRILSLAFDRRNRLLIATDGGGINIMDTEKESFSYQTA 302

Query: 286  PFIVADYNSYNGMNGNSINDIYIDDEERIWMANYPIGITIQNNRYPSYKWIKHSVGNKQS 345
                    S + +N N+I+ I  D+E RIW+     GI + + +   +K I  +  ++QS
Sbjct: 303  G------ESPSSLNSNAISVILKDEEHRIWVGTLRGGINVLDRKRNEFKHIYRNPLSQQS 356

Query: 346  LINDQVNSIIEDSEGDLWYGTNNG-ISLQDSKTGKWRSFLSTFENVQNSKNHIFTTLCEV 404
            L++D + S  ED +G +W GT+ G ISL D   G ++++     N Q+  ++  T++   
Sbjct: 357  LVSDFILSFCEDRDGKIWIGTDGGGISLWDRLKG-FKTYRHENGNPQSLSSNNVTSIVRS 415

Query: 405  SPGIIWAGGYFSGLYQIDKRTSKTTYFTPASYAHESIRPDKYIRDIRKDSRGYVWSG--- 461
            +  +IW   +  G+ + ++ +    Y+  A+    S   D+ +  +  D +G +W+G   
Sbjct: 416  NNDVIWIATFGGGINRYNRGSGTFKYYPCAN----SWGKDENVWKLFIDKKGGIWAGTCV 471

Query: 462  GYYNLKRINVQTKDIRLYHGLHSVTAIIEKDDK--SMWIGTATGLFLLDIESGK---YER 516
            G   L   NV +     ++  H    I   +DK  ++W G+   L+      GK   Y+ 
Sbjct: 472  GVGLLYHYNVASDRFEPFNNEHLKNIIAINEDKLGNLWFGSFNKLYKYTA-GGKVITYD- 529

Query: 517  IQLPVESTYVYSLYQTKQGSLYIGTSGSGVLIYDPQTKLFTHYYTGNCAMISNNIYTILS 576
            I+ P+ S     ++  K G L++GT  +G+L Y+ +   F   +T +  + +N +  I  
Sbjct: 530  IRYPIRS-----IFFNKSGDLFVGTQYAGLLKYNSKNGSF-QAFTESDGLSNNTVLNIEE 583

Query: 577  DEDNEILLSTENGLTSFYPKQKTFYNWTKEMGLMTTHFNALSGTLRRNNNFIFGSSDGAI 636
            D+   + LST NGLT F  +  TF  +  E GL    FN  +    R+   +FG   G  
Sbjct: 584  DDHANLWLSTFNGLTKFNYRNNTFNKFYIENGLQCNEFNYNASAHLRSGQLLFGGIKGFN 643

Query: 637  EFNKDMKLPRTYSSKMIFSDFKLFYQTVYPGDKNSPLEKDINETKELRLKYNQNIFSLMV 696
             FN D  +  +    +  +D +   +   P   ++     + +TKE+++ Y++ + S   
Sbjct: 644  IFNPDSIMNNSAFPPLRLTDLRASNE---PLISDAAYSASLYDTKEIKIPYDRALLSFDY 700

Query: 697  SSINYDYPSNVLYSWKLEEFYEEWSKPGNESTIRYTNLAPGKYVLRVRAISNEDQRVMLE 756
            S++ Y +PS + YS+ LE     W+      +  Y+ L  G YVL +R+ +N +      
Sbjct: 701  SALEYSFPSRISYSYYLEGLENNWNNVRTARSGNYSRLHEGTYVLHIRS-TNGEGIWNPR 759

Query: 757  ERSIDIIIAQPFWLTPWAMILYAILISLIAV---------------IILRVLILKKQRKV 801
            + ++ III  P++ + WA + Y  +IS +                 I +     +K+R++
Sbjct: 760  QLTLKIIILPPWYRSWWAYLTYLAIISYLLYRFNRYKSNQVRLNYQIEMATANAEKEREL 819

Query: 802  SDEKIHFFINTAHDIRTPLTLIKAPLEDLREKEALSKEGIANMNTAIRNVNALLRLTTNL 861
            ++ K+ FF + +H+ R+PLTLI  P+++L      + + +++++    N   LL L   L
Sbjct: 820  NERKLSFFTHISHEFRSPLTLIINPVKELLYSSGKNID-VSDLSIVYLNAKRLLSLVDQL 878

Query: 862  INFERADVYSSELYISEHELNTFMTEIFNAFQPYANIKHINFTYESNFRYMNVWFDKEKM 921
            + F +AD    +L IS+  +     ++F  F   A +K+I+ T+ES   Y+ ++ D+EK+
Sbjct: 879  LLFRKADHEEDDLKISKLNIVLVCKDVFLCFTSQARLKNIDITFESAEEYIEIFADREKI 938

Query: 922  ESILKNIISNALKYTPENGNVQIFVSENNDSWSVEVKDTGIGIPASEQKKLFKLHFRGSN 981
            E +L NI+SNA K+T +NG++ + V + +   ++ ++D G GI      KLF   ++   
Sbjct: 939  EIVLFNILSNAFKFTEKNGSIHVKVEDYDGRIAILIQDNGRGIHPEIGDKLFDKFYQAPK 998

Query: 982  AINSKVTGSGIGLMLVWKLVRLHKGKINLSSVENQGSVIKISFPK------------DSK 1029
            + N  V G GIGL L  K +  HKG++   S   +G+V +I   K            +  
Sbjct: 999  SYNVSVKGFGIGLYLAKKFITSHKGELTYHSEIGEGTVFRIELLKGLEHLAGITVHHEDT 1058

Query: 1030 RFHKAHLATPSKRRQE-ITSTTNVPASIYENVHKEQNPNHQRILIVEDNDELRNYLSQTL 1088
             F    L    +  +E +T+     +   +N+  EQ      ILIV+DN+  R Y+ +  
Sbjct: 1059 EFIMPDLDLAEEEAEEPVTAMEQPDSGELDNLVSEQ----PAILIVDDNELFRQYIKRIF 1114

Query: 1089 AEEYTVQNCCNGKEALTIIPEYKPELVISDIMMPEMRGDELCDAIKNNIETSHIPVILLT 1148
             E + +    +G++ L    +  P+++ISD+ MP   G +LC  IK +   SHIPVILLT
Sbjct: 1115 KESFIIYEAVDGEDGLIKAKKQLPDIIISDVTMPVKDGIQLCTEIKADPAISHIPVILLT 1174

Query: 1149 ALNNEKDILSGLQIGADEYIVKPFNIGILKATVSNLLINR-ALLRSKYGSLDMDDEDDHE 1207
            +  + +  L GL+ GA++YI KPF   +L A ++N+L +R +L R  Y ++ +  ++   
Sbjct: 1175 SSTSSEIKLKGLECGAEDYITKPFEAELLTARINNILKSRNSLQRYFYNAVTLQADNQKI 1234

Query: 1208 DECINCSQDIDWKFIANVRKNIEDNIDNPALTVDVLCNLMGMSRTSFYNKLRALTDQAPG 1267
                        +F++      E ++DNP     VL N +GMS ++ Y K+++++ ++  
Sbjct: 1235 SPTFK-------EFLSKCISITERHLDNPDFNTKVLANEVGMSHSALYKKVKSISGKSIN 1287

Query: 1268 DYIRLIRLKRSVKLLKEGTHSITEIAEMTGFSDAKYFREVFKKHFNVSPSQYGKE 1322
            ++IR IRL+++ +LL +    + E A   GF++ KYFRE F K F ++PS+Y K+
Sbjct: 1288 EFIRFIRLRKAAELLIQTDSRVNEAAFRAGFNNQKYFREQFTKLFEMTPSEYIKK 1342