Pairwise Alignments

Query, 1346 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1373 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  533 bits (1374), Expect = e-155
 Identities = 396/1359 (29%), Positives = 670/1359 (49%), Gaps = 65/1359 (4%)

Query: 6    FLLLLFPLTCVAQT---YQYLGVEDGLSNRRVYYIQKDNVGYMWFLTHEGIDRYNGKEFK 62
            F L+ F +   AQ    +++L VE+GL+   V  I +D  G++WF T  G+++Y+ K FK
Sbjct: 31   FTLVFFIIVSNAQNKYAFKHLNVENGLTQSSVLSIAQDARGFIWFGTRFGLNKYDSKSFK 90

Query: 63   -RYKLMDGDKELNSLLNLNWLYIDPEGTLWEIGKKGKIFRYDRIHDTFELVYKLPIEDFK 121
              Y   + +K L++   L+ +    +GTL  IG    + +Y+   D F+       +   
Sbjct: 91   VYYHEENNEKSLSNASFLSSILALKDGTLL-IGTSNGLNKYNEGDDNFDHYVHNSKDPNS 149

Query: 122  DLPAPITFSWIDHNNHIWLCNEETIFLYNTRTEEVTHVKNCLSEAINDIEQIDESH---Y 178
               A I+  + D  N +W+     + L +T  +          +    I  I E H    
Sbjct: 150  ISNAGISCIFQDKKNRVWIGTTNGLNLLSTNGKYKFKRFLDKQKQRQQIYAITEDHNGTL 209

Query: 179  FIGTEMGIHHAQLKNNTLQLLPCDKLDNVNIQVNDLHFDPKIR----KLFIGAFERGVMV 234
            ++ T  G+ + + K+  + L           +  D H    +      L+IG  + GV  
Sbjct: 210  WLSTTYGLVNMRFKDGKIHLRYFKDFSEELNKAIDNHITTMVEDRENNLWIGTKQTGVSK 269

Query: 235  YDMNTKTITQPEVSLKDVSISRIKPLNAKELLIATDG----GGIYKMNVDTYQTVPF--- 287
             +++T+TIT  + S   ++ + I   N +++++  +G    G ++ +N+    T  F   
Sbjct: 270  LNLSTETITSYQYS--SLNPAGISSNNVRKIMMDQEGKLWIGTLHGINIYNPATKNFSSL 327

Query: 288  --IVADYNSYNGMNGNSINDIYIDDEERIWMANYPIGITIQNNRYPSYKWIKHSVGNKQS 345
              I  D  S   ++ NS+ DIY D +  IW+  Y   I +    Y  +K +  S      
Sbjct: 328  HNIPEDPTS---LSQNSVYDIYQDRQGIIWVGTYYGAINMVYPNYTPFK-VYRSTTAPNG 383

Query: 346  LINDQVNSIIEDSEGDLWYGTNN-GISLQDSKTGKWRSFLSTFENVQNSKNHIFTTLCEV 404
            L ++ V+SI+ED   +LW GT   G++  D K   +  + +   + ++   ++  ++   
Sbjct: 384  LSSNVVSSIMEDQHQNLWIGTEGEGLNYYDRKNDTFTRYKNNPNDPKSLSANLVKSVIRD 443

Query: 405  SPGIIWAGGYFSGLYQIDKRTSKTTYFTPASYAHESIRPDKYIRDIRKDSRGYVWSGGYY 464
                IW G ++ GL      T     +T       SI  D+ I  + +DS G  W G   
Sbjct: 444  KKNRIWVGTHYGGLNLFQPETKTFVRYTKHKNDTSSISNDE-ITALFEDSYGRFWVGTNG 502

Query: 465  NLKRINVQT-KDIR-LYHGL-HSVTAIIEKDDKSMWIGTATGLFLLDIESGKY-ERIQLP 520
             L   N  T K IR   +GL  +V  I E   + +W+ T +GL+ L  +S ++  R+   
Sbjct: 503  GLNSFNSTTGKFIRNRVNGLTDAVHYIFEDAKRCLWVATNSGLYQLKKDSQRFISRVAAD 562

Query: 521  VES---TYVYSLYQTKQGSLYIGTSGSGVLIYDPQTKLFTHYYTGNCAMISNNIYTILSD 577
             E      +  L   K G L +GTS +G+   +P    ++   T +  + SNNI  IL D
Sbjct: 563  PEILKYNEITCLTTDKAGYLLMGTSHNGLFRLNPGRHSYSRMTTFD-GLPSNNIMGILED 621

Query: 578  EDNEILLSTENGLTSFYPKQKTFYNWTKEMGLMTTHFNALSGTLRRNNNFIFGSSDGAIE 637
            + N + ++T+ GL  + P+QKTF  +  + GL    FN  S        F FG   G + 
Sbjct: 622  DFNNLWITTDKGLCKYNPRQKTFKTYNIKDGLPGNEFNYKSFLRDSKGAFFFGGLSGMVS 681

Query: 638  FNKDMKLPRTYSSKMIFSDFKLFYQTVYPGDKNSPLEKDINETKELRLKYNQNIFSLMVS 697
            F  +       +  +IF+  KLF + +     +  L+++I+  K +  + +QN+FS+  +
Sbjct: 682  FFPNEIKENKNTPPVIFTGLKLFNKPIALHTGDGLLKQNISTIKSITFESDQNVFSIDFT 741

Query: 698  SINYDYPSNVLYSWKLEEFYEEWSKPGNESTIRYTNLAPGKYVLRVRAISNEDQRVMLEE 757
             +N+       Y++KL  F + W+     S   YTNL+PG Y L V+  SN D     E 
Sbjct: 742  LLNFIKSDKNRYAYKLGGFEKNWNYVDIPSA-SYTNLSPGNYTLMVKG-SNNDGLWTNET 799

Query: 758  RSIDIIIAQPFWLTPWAMILYAILISLIAVIILRVL----ILKKQRKVSDEKIHFFINTA 813
             ++DI I  PF+ T WA + Y    + I+ + +R L    +LKK++++++ K+ FF N +
Sbjct: 800  STLDIKILPPFYRTWWAYLFYFCAFAAISFVFIRYLLIKAVLKKEKEINEHKLEFFTNIS 859

Query: 814  HDIRTPLTLIKAPLEDLREKEALSKEGIANMNTAIRNVNALLRLTTNLINFERADVYSSE 873
            H+IRTPLTLI  PL+ L E          ++     N + L+ L T L++F +A+     
Sbjct: 860  HEIRTPLTLIVGPLDKLIENAKDDPALNRDLQPIKNNADRLMNLVTELLDFRKAESGKMA 919

Query: 874  LYISEHELNTFMTEIFNAFQPYANIKHINFTYESNFRYMNVWFDKEKMESILKNIISNAL 933
            L++S  ++  F  EIF AFQ  A  K+I++ +E+    + ++FDK +ME ++ N++SNA 
Sbjct: 920  LHVSPGDVVKFCREIFLAFQNMAISKNIDYQFETTQAAIELYFDKVQMEKVMFNLLSNAF 979

Query: 934  KYTPENGNVQIFVSENNDSWSVEVKDTGIGIPASEQKKLFKLHFRGSNAINSKVTGSGIG 993
            K+TP NG + + +       ++++ D G GIP   Q  LF  +F  +NA  +   G+G+G
Sbjct: 980  KFTPVNGKISLKIETEKQLVNIKICDNGKGIPLENQASLFT-NFYQANATTT--IGTGLG 1036

Query: 994  LMLVWKLVRLHKGKINLSSVENQ-----GSVIKISFPKDSKRFHKA-----HLATPSKRR 1043
            L     +V LH G+I+  S          +   +S     + F+ +     ++       
Sbjct: 1037 LSFSKSIVELHHGQISFESTPKNDKAFGNTAFTVSLKTGKEHFNPSDFIPDYVYYDDALN 1096

Query: 1044 QEITSTTNVPASIYEN--VHKEQNPNHQR-ILIVEDNDELRNYLSQTLAEEYTVQNCCNG 1100
              +++TT V   I E+  +  +   N +  IL+VEDN+++R ++ Q L+  Y +    NG
Sbjct: 1097 YSLSTTTQVTEQIKEDDVLQDDSGKNKKNSILLVEDNEDVRTFIKQALSPSYQIYERENG 1156

Query: 1101 KEALTIIPEYKPELVISDIMMPEMRGDELCDAIKNNIETSHIPVILLTALNNEKDILSGL 1160
               L    +  P+L+ISD+MMP M G ELC  +K +  TSHIPV+LLTA +     ++G 
Sbjct: 1157 ATGLECALDLIPDLIISDVMMPVMDGLELCRKLKTDERTSHIPVVLLTARSAYVHQVNGF 1216

Query: 1161 QIGADEYIVKPFNIGILKATVSNLLINRALLRSKYGSLDMDDEDDHEDECINCSQDIDWK 1220
            + GAD YI+KPFN+ IL+  + NLL  R  ++ K+  +   +     +  IN ++     
Sbjct: 1217 ENGADAYIMKPFNLKILELNIQNLLNARETVKKKFAQVITLEP---RNMVINTTEQ---H 1270

Query: 1221 FIANVRKNIEDNIDNPALTVDVLCNLMGMSRTSFYNKLRALTDQAPGDYIRLIRLKRSVK 1280
            F+  + + IED I +P   V  L   +GMS+   Y K+RALTD +  D+I+ +R+KR+ +
Sbjct: 1271 FLNKIIQLIEDRIADPDFDVPTLSAEVGMSQPVLYKKIRALTDLSVNDFIKSLRIKRAAQ 1330

Query: 1281 LLKEGTHSITEIAEMTGFSDAKYFREVFKKHFNVSPSQY 1319
            LLK+GT +I EIA   GF+D KYF   FKKHF  +PS++
Sbjct: 1331 LLKQGTGNIAEIAYSVGFNDRKYFSSEFKKHFGKTPSEF 1369