Pairwise Alignments

Query, 249 a.a., putative polysaccharide biosynthesis protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 256 a.a., spore coat protein from Cupriavidus basilensis FW507-4G11

 Score = 82.4 bits (202), Expect = 8e-21
 Identities = 64/247 (25%), Positives = 109/247 (44%), Gaps = 11/247 (4%)

Query: 1   MNYAFVVQARLGSTRLPGKILKPFYGNQSILDLMVHKLSAISNIP-VIIATTNSVINEPI 59
           M    ++QAR  STRLPGK+LKP  G   IL   + +L     I  +++ T+++  ++ +
Sbjct: 1   MTVMALLQARSSSTRLPGKVLKPLLGEPMILR-QIERLRRSRKIDRLMVVTSDNSSDDEL 59

Query: 60  EKKALALGVKCFRGEENDVLKRFIDVAEYFDIQGIFRICSDNPFLDVHAARQLVEIAMKS 119
               +  GV+ FRG  +DVL RF    +    Q + R+ +D P  D      +++     
Sbjct: 60  AACCVEAGVEVFRGSLDDVLDRFYSAVKDIRPQHVVRLTADCPLADPEVIDAVIDFYRDG 119

Query: 120 CNDYISFDIDGT-PSIKTHFGFWGEFVTLDALKRVIGFTDDLLYREHVTNYIYSHPELFN 178
             DY S  ++ T P      G   E      L+ +         REHVT++IY HPE F 
Sbjct: 120 DFDYASNVLEPTYPD-----GLDAEVFRFGVLETIWQEASLASQREHVTSFIYQHPERFR 174

Query: 179 IQWISGSPVVSKHHNIRLTIDTLEDFSVAQRIYRDLQEKRVEISIEVIVDYVRRHAEYIQ 238
           +  +     +S    +R T+D   D      +Y  L        +  ++  + +  E I+
Sbjct: 175 LGCLKRESDLSA---LRWTVDEPSDLEFVTAVYGALYRDNPAFLMADVLRLLAQRPELIE 231

Query: 239 LMKQQIK 245
           +   Q++
Sbjct: 232 INAGQLR 238