Pairwise Alignments

Query, 391 a.a., putative membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 439 a.a., Small-conductance mechanosensitive channel from Pseudomonas stutzeri RCH2

 Score =  244 bits (624), Expect = 3e-69
 Identities = 131/381 (34%), Positives = 231/381 (60%), Gaps = 23/381 (6%)

Query: 29  ETIIAILMIAIAVGV-DYLCQAILVGGMRQYTRRKPHLWNTLLMKRKVFHNLIHTIPAIL 87
           +T++A   +  A  + +++ + ILV G+ +  +   H     L    V   L + +PA++
Sbjct: 19  QTLLASATLIFAAWLSNWVVKRILVRGLYRLLQ---HTRENKLQDFGVIKRLSNIVPALV 75

Query: 88  VYALLPMAFMRGKELLVISQKACAIYIIFSLLLAINGILLMIMDIYDGKETMKNRPMKGF 147
           +   +       +  + + Q  C  +I+ ++ LA+  +L ++  IY  +   +  P+KG+
Sbjct: 76  LSIGVTTVPGLPEAAVTVVQNVCGGFIVLTIALALGAVLDIVNLIYQRRPDSRLHPIKGY 135

Query: 148 IQVLQVLLFFIGGIVIISILVNKSPASLFAGLGASAAILMLVFKDSILGFVAGIQLSAND 207
           +QV++++++ I  I+II+ L+++SP  L +GLGA AA+LML+F+D++L  VA +Q+++ND
Sbjct: 136 LQVVKIVVYAIATILIIATLIDRSPLILLSGLGAMAAVLMLIFQDTLLSLVASVQITSND 195

Query: 208 MVRPGDWITLPSGAANGTVQEITLNTVKIQNFDNTISTVPPYTLVSSPFQNWRGMKDSGG 267
           ++R GDW+ +P   A+G V +I L+TVKIQN+D TI+++P    +S  F+NWRGM++SGG
Sbjct: 196 LIRVGDWVEMPQLNADGDVIDIALHTVKIQNWDKTITSIPTKRFISDSFKNWRGMQESGG 255

Query: 268 RRVMKNITLDLTTLQFCTPE---------MLDRY----RKEIPLMADYQPEEGVVPTNSQ 314
           RR+ +++ LD  ++ F + E         +LD Y     +EI        E G  P N++
Sbjct: 256 RRIKRSLYLDQQSVHFLSREECERLHRFNLLDEYLTEKTREIEAWNAKLEERGKEPVNTR 315

Query: 315 ------VYRVYIERYLCSLPVVNQDLDLIISQKEATMYGVPIQVYFFSRNKVWKEYERIQ 368
                  +R Y+ERYL S   ++Q++ LI+ Q   T  G+P+++Y F+    W +YE IQ
Sbjct: 316 RITNIGSFRAYVERYLRSHGGIHQNMTLIVRQLSPTADGLPLEIYCFTNTVAWTQYEAIQ 375

Query: 369 SDIFDHLLAMVPKFDLKVYQY 389
           SDIFDHLLA++P+F L+V+Q+
Sbjct: 376 SDIFDHLLAILPEFGLRVFQH 396