Pairwise Alignments

Query, 279 a.a., transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 301 a.a., Transcriptional activator of 4-hydroxyphenylacetate 3-monooxygenase operon, XylS/AraC family from Pseudomonas fluorescens FW300-N2E2

 Score = 72.0 bits (175), Expect = 1e-17
 Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 2/162 (1%)

Query: 117 ERRQLDQITEAMENEFTVSDSLQEEMLRILLKRFIIQCTRIARQRLDITREKESGFEIVR 176
           E R+L+ + E +  E T     +   L  L +  +I   R+    L+    +    +I  
Sbjct: 139 EVRRLEYLFEELSEEVTAGRPGRSATLDALTRLIMISLLRLCSNSLEARPARHEDLKIFH 198

Query: 177 QYYNLVDEHYRTKKQVQDYADMLHKSPKTLSNIFST-CKLPSPLRVIHERVEAEAKRLLL 235
           ++  L++ HY     +  YA+ +  +   L+++      LPS  R+I ER+  EAKRLLL
Sbjct: 199 RFNELIEAHYLQHWPLSRYAEGIGVTEARLNDVCRRIADLPSK-RLIMERLMQEAKRLLL 257

Query: 236 YSNKSAKEIADILGFEDQASFSRFFKNMTGQSAVQFRNTEVG 277
           ++  SA EI   LGF+D A FSRFF+     +  ++R  + G
Sbjct: 258 FTGSSANEICYQLGFKDPAYFSRFFQRYAQLTPGEYRQRQSG 299