Pairwise Alignments

Query, 279 a.a., transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 307 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score = 58.5 bits (140), Expect = 2e-13
 Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 5/178 (2%)

Query: 99  GFLFNGSSHLVRFTLNEEERRQLDQITEA----MENEFTVSDSLQEEMLRILLKRFIIQC 154
           G  F+GS +L        E   +  I+ A    ++N       L E +      R I + 
Sbjct: 118 GECFDGSEYLTMRFERGFEDDLIASISNAILLELKNSTPSGKLLVESLACSAAARLIQRF 177

Query: 155 TRIARQRL-DITREKESGFEIVRQYYNLVDEHYRTKKQVQDYADMLHKSPKTLSNIFSTC 213
           T     RL  + R   +G + +RQ  + ++++  +   + D A + + S    +  F + 
Sbjct: 178 TSAMPSRLASLERVPNAGVKRIRQVMDYIEDNIESNISLDDLAAVAYLSRFHFARSFKSA 237

Query: 214 KLPSPLRVIHERVEAEAKRLLLYSNKSAKEIADILGFEDQASFSRFFKNMTGQSAVQF 271
              +P R ++ER    AK LL +S  S  E+A IL F  QA+FSR F   TG++  +F
Sbjct: 238 TGKTPQRYVNERRMERAKYLLTHSTHSIAEVAMILSFSSQATFSRAFHQHTGKTPNEF 295