Pairwise Alignments

Query, 221 a.a., ABC transporter ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 230 a.a., putative macrolide efflux ABC transporter, ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  211 bits (538), Expect = 7e-60
 Identities = 111/217 (51%), Positives = 150/217 (69%), Gaps = 2/217 (0%)

Query: 1   MITLTSLSKIYRTDEIETVALENVNLTVDRGEFLSIMGPSGCGKSTLLNIMGLLDAPTTG 60
           MI+L +L+K +R  + E  AL  V++ + + EF++IMGPSG GKSTL+NI+G LD PT+G
Sbjct: 1   MISLQALTKSFRMGDAEVQALRGVDIHIRQNEFVAIMGPSGSGKSTLMNIIGCLDRPTSG 60

Query: 61  TVEINGTHTEGMKDKQLAAFRNKTLGFVFQSFHLINSLNVMDNVELPLLYRRIGSGERKR 120
              +NG+   G+ D  L+A RN+ +GFVFQSFHL+  L+ +DNV LPL +     G+R+ 
Sbjct: 61  NYLLNGSAVGGLSDDALSAVRNREIGFVFQSFHLLPRLSALDNVLLPLRFSETPRGDRQH 120

Query: 121 LAKEVLEKVGLSHRMNHFPTQLSGGQCQRVTIARAIIGHPEIILADEPTGNLDSKMGAEV 180
            A E+LE+VGL  R++H P QLSGGQ QRV IARA++  P ++LADEPTG LDSK   E+
Sbjct: 121 -AIELLERVGLGQRLDHRPNQLSGGQRQRVAIARALVNRPTLLLADEPTGALDSKTSVEI 179

Query: 181 MELLHRLNKEDGRTIVMVTHNEEQAKQTSRTIRFFDG 217
           M L   L+   G+TIV+VTH EE A+   R IR  DG
Sbjct: 180 MALFDELHL-SGQTIVLVTHEEEVAECAGRIIRMRDG 215