Pairwise Alignments

Query, 221 a.a., ABC transporter ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 240 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  224 bits (572), Expect = 8e-64
 Identities = 111/218 (50%), Positives = 152/218 (69%), Gaps = 1/218 (0%)

Query: 1   MITLTSLSKIYRTDEIETVALENVNLTVDRGEFLSIMGPSGCGKSTLLNIMGLLDAPTTG 60
           M+T+ +++K+++TD +ET AL + NL V  GEF+++ GPSG GK+T LNI GLL+  T G
Sbjct: 1   MLTMKNINKVFKTDLVETHALRDFNLEVKEGEFVAVTGPSGSGKTTFLNIAGLLEGFTNG 60

Query: 61  TVEINGTHTEGMKDKQLAAFRNKTLGFVFQSFHLINSLNVMDNVELPLLYRRIGSGERKR 120
              ++  +   + D + AA RN+ +GF+FQ F+LI  LN+ +NVE+PL YR   + ER+R
Sbjct: 61  EYHLDDVNISNLSDNKAAAIRNEKIGFIFQGFNLIPDLNLAENVEVPLRYRGFNAKERQR 120

Query: 121 LAKEVLEKVGLSHRMNHFPTQLSGGQCQRVTIARAIIGHPEIILADEPTGNLDSKMGAEV 180
             K  LE+VGL  RM H P+QLSGGQ QRV IARA+ G P  +LADEPTGNLDS M  +V
Sbjct: 121 RVKAALEQVGLGARMKHLPSQLSGGQQQRVAIARALAGEPRFLLADEPTGNLDSLMARQV 180

Query: 181 MELLHRLNKEDGRTIVMVTHNEEQAKQTSRTIRFFDGR 218
           MELL  +NK  G TI+MVTH+ E A++  R I+  DG+
Sbjct: 181 MELLEEINKA-GTTIIMVTHDPELARRAQRNIQIVDGQ 217