Pairwise Alignments

Query, 221 a.a., ABC transporter ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 238 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Sphingomonas koreensis DSMZ 15582

 Score =  196 bits (498), Expect = 3e-55
 Identities = 102/217 (47%), Positives = 137/217 (63%)

Query: 1   MITLTSLSKIYRTDEIETVALENVNLTVDRGEFLSIMGPSGCGKSTLLNIMGLLDAPTTG 60
           +I L +++K++        AL+ V+L +   +F+++MGPSG GKST +NI+G LD PT+G
Sbjct: 7   IIRLRNITKVFGEGATAFQALKGVDLDIAERDFVAVMGPSGSGKSTTMNILGCLDVPTSG 66

Query: 61  TVEINGTHTEGMKDKQLAAFRNKTLGFVFQSFHLINSLNVMDNVELPLLYRRIGSGERKR 120
                G + E +   Q A  R K LGFVFQ F+L++  N ++NVELPLLYR      R  
Sbjct: 67  EFLFKGVYIETLDRDQRALVRRKYLGFVFQGFNLLSRTNALENVELPLLYRGEDKKVRHE 126

Query: 121 LAKEVLEKVGLSHRMNHFPTQLSGGQCQRVTIARAIIGHPEIILADEPTGNLDSKMGAEV 180
           L    LEKVGL+   +H P +LSGGQ QRV IARAI+  P ++LADEPTGNLDS    E+
Sbjct: 127 LGMAALEKVGLADWWDHTPAELSGGQPQRVAIARAIVTSPAVLLADEPTGNLDSARSVEI 186

Query: 181 MELLHRLNKEDGRTIVMVTHNEEQAKQTSRTIRFFDG 217
           MELL  LNK+ G T++MVTH  + A      + F DG
Sbjct: 187 MELLTSLNKDSGITVLMVTHEPDMAAFARTIVHFKDG 223