Pairwise Alignments

Query, 429 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 435 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 82.0 bits (201), Expect = 3e-20
 Identities = 86/325 (26%), Positives = 138/325 (42%), Gaps = 38/325 (11%)

Query: 120 SVLQVDDDFWKVFKFDFLSGYPFDKATFDAGATKAVISEDIARQLFGTSDVVGKTFLLNH 179
           S+   D DF+ +F   FL G  +DK   +      VI +++  +LF   + VG+T  LN 
Sbjct: 116 SIRVTDSDFFALFSVPFLYGSVWDKEVDEVPEYLVVIGKELNDKLFDGRNSVGETLYLNT 175

Query: 180 SAYMICGVVRPVSKLARY---------AYAQIWIPLSST--DAFTASWGE---YGIMGMV 225
             Y I GV    S   RY             +++P S T  + F   WG    +    M+
Sbjct: 176 KPYRIVGVTDDWSPKPRYYDLTTGSMQEAELLFVPFSLTPIEEFEV-WGNTNGWKFETML 234

Query: 226 SVYILAKSQDDFPAIRMEAERLRDR-----YMEGYPD-YELLYRDQPDTYFVAAQRYSAN 279
           +      S+  +    +E +    R     Y++ + D  + L R   +T    A+     
Sbjct: 235 TYQDRMASEKAWLQFWVEVDGAEQRKAYQEYLDAHVDTQQQLGRFTDNTRDAWARTLDVA 294

Query: 280 NPPAVKQAV---RQYIITLIIL-LIVPAVNLSGLTLSRMRKRLSEIGVRKAFGAPRRELM 335
                   V    + +I L +L L+V  VN+ GL LS+  KR  EIGVR+A GA +R++ 
Sbjct: 295 ELLDFHHVVPEDNKILIGLSLLFLLVCLVNILGLMLSKFLKRAPEIGVRRAIGASKRQIF 354

Query: 336 IQVLSENMLYSLLGGVLGLILSYGATFFLGSMLFSIDFMGNGVTDLRTMCMDLLFDPVVF 395
            Q L E      +GGV GL+ ++ A  +L    F  + M N              D  ++
Sbjct: 355 AQHLVEVGCIGAIGGVFGLLWAWVALQYLAKRFFLEEAMSN-------------LDASIW 401

Query: 396 LLAFFACFALNLLSAAIPAWRVTRT 420
           ++A     A  +L+   PAW + +T
Sbjct: 402 IIAPSIAIASAMLAGMYPAWVICKT 426