Pairwise Alignments

Query, 362 a.a., hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 180 a.a., OmpA domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 53.1 bits (126), Expect = 5e-12
 Identities = 30/115 (26%), Positives = 65/115 (56%), Gaps = 5/115 (4%)

Query: 242 APVVEQPQPKKEVVIEPLKQN--IFFALNSAKIQDDQQAKISSLVEYLEKHSAAKVSVTG 299
           AP++  P+ ++ +  + L++   I+F  + + +  D    +++  EYL +H   +V + G
Sbjct: 56  APILT-PEEQQRIKYQELRKEHIIYFDFDRSSVSSDFSEVLNAHGEYLLEHPNVRVMIEG 114

Query: 300 YADKETGNPNINMTLSEKRAKNVIEMLKAKGVVADRI-VIGYKGDTVQPYQKPEE 353
           +AD E G P  N+ L E+RAK V + L++ GV+  ++ ++ Y  +  Q + + ++
Sbjct: 115 HAD-ERGTPEYNIALGERRAKAVAKYLQSMGVLPSQMSIVSYGEEKPQDFSRTDD 168