Pairwise Alignments

Query, 524 a.a., Ribonuclease G (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1150 a.a., ribonuclease E from Pantoea sp. MT58

 Score =  256 bits (654), Expect = 3e-72
 Identities = 166/524 (31%), Positives = 274/524 (52%), Gaps = 40/524 (7%)

Query: 1   MTSEIVIDVQPKEVSIALLEDKSLVELQSEGRNISFSVGNMYLGRIKKLMPGLNACFVDV 60
           M   ++   Q +E+ +AL++ + L +L  E         N+Y G+I ++ P L A FVD 
Sbjct: 1   MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY 60

Query: 61  GYEKDAFLHYLDLGPQFNSLEKFVKQTLSDKKKLNSISKATLLPDLDKDG--TVANTLKV 118
           G E+  FL                         L  IS+       +  G   + + L+ 
Sbjct: 61  GAERHGFL------------------------PLKEISREYFPSSYNAHGRPNIKDVLRE 96

Query: 119 GQEVVVQIVKEPISTKGPRLTSEISFAGRYLVLIPFNDKVSVSQKIKSSEERARLKQLLM 178
           GQEV+VQI KE    KG  LT+ IS AG YLVL+P N +     +    ++R  LK+ L 
Sbjct: 97  GQEVIVQIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALS 156

Query: 179 SIK-PKNFGVIVRTVAEGKRVAELDGELKVLIKHWEDAMAKVQKATKYPTLIYEETSRAV 237
           ++  P+  G+IVRT   GK    L  +L   +KHWE A+ K  +    P LI++E++  V
Sbjct: 157 ALDLPEGMGLIVRTAGVGKSAESLQWDLSFRLKHWE-AIKKAAENRPAPFLIHQESNVIV 215

Query: 238 GLLRDLFNPSFENIHVNDEAVYNEIKDYVTLIA-PDRANIVKLYKGQLPIYDNFGITKQI 296
              RD        I +++  V    + ++  +  PD ++ +KLY G++P++ ++ I  QI
Sbjct: 216 RAFRDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQI 275

Query: 297 KSSFGKTVSYKSGAYLIIEHTEALHVVDVNSGNRTKNANGQEGNALEVNLGAADELARQL 356
           +S+F + V   SG  ++I+ TEAL  +D+NS   T+  + +E  A   NL AADE+ARQL
Sbjct: 276 ESAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEE-TAFNTNLEAADEIARQL 334

Query: 357 RLRDMGGIIVVDFIDMNEAENRQKLYERMCANMQKDRARHNILPLSKFGLMQITRQRVRP 416
           RLRD+GG+IV+D+IDM    +++ +  R+   +++DRAR  I  +S+FGL++++RQR+ P
Sbjct: 335 RLRDLGGLIVIDYIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRLSP 394

Query: 417 AMDVNTTEICPTCFGKGTIKSSILFTDTLESKIDYLVNKLKVKKFSLHVHPYVAAFINQG 476
           ++  ++  +CP C G GTI+ +    ++L   I  L+ +  +K  +  VH  V   +   
Sbjct: 395 SLGESSHHVCPRCSGTGTIRDN----ESLALSILRLIEEEALKDNTKEVHAIVPVQVASY 450

Query: 477 LVSLRRK-----WQMKYGFGIKIIPSQKLAFLQY-VFYDTHGEE 514
           L++ +R+      + + G    I+P  K+    Y V     GEE
Sbjct: 451 LLNEKREAVNAIEKRQGGVRAIIVPDDKMQTPHYSVLRVRKGEE 494