Pairwise Alignments

Query, 229 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 241 a.a., two component transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  165 bits (417), Expect = 8e-46
 Identities = 93/225 (41%), Positives = 136/225 (60%), Gaps = 6/225 (2%)

Query: 5   RILVVDDEEDLCEILKFNLENEGYEVDTANSAEEALKMDISSY-HLILLDVMMGEISGFK 63
           RIL+V+DE  + E+L F LE  G+   TA   + AL M    Y  L+LLD M    SG +
Sbjct: 16  RILIVEDELAIREMLAFVLEQHGFTTTTAEDFDSALDMLSEPYPDLVLLDWMFPGGSGIQ 75

Query: 64  MANMLKKDKKTARVPIIFITAKDTENDTVTGFNLGADDYISKPFSLREVIARVKAVLRRT 123
           +A  L++D+ T  +P+I +TA+  E D V G  +GADDYI+KPFS +E++AR+KAV+RR 
Sbjct: 76  LAKKLRQDEFTRHIPVIMLTARGEEEDKVKGLEVGADDYITKPFSPKELVARIKAVMRRA 135

Query: 124 ATMETEKAPERLTYQSLVIDITKKKVSIDDEEVQLTKKEFEILLLLVQNKGRVFSREDIL 183
           A    E   E +  Q LV+D    +V++ D+ +++   EF +L   + +  RV+SRE +L
Sbjct: 136 APTALE---EPIDVQGLVLDPVSHRVTVGDQVLEMGPTEFRLLHFFMTHPERVYSREQLL 192

Query: 184 ARIWSDEVYVLDRTIDVNITRLRKKI--GEYGKCIVTRLGYGYCF 226
             +W   VYV DRT+DV+I RLRK +    + + I T  G GY F
Sbjct: 193 DNVWGTNVYVEDRTVDVHIRRLRKAVEPSNHDRLIQTVRGAGYRF 237