Pairwise Alignments

Query, 229 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 235 a.a., chemotaxis protein CheY from Cupriavidus basilensis FW507-4G11

 Score =  143 bits (361), Expect = 2e-39
 Identities = 89/227 (39%), Positives = 134/227 (59%), Gaps = 12/227 (5%)

Query: 6   ILVVDDEEDLCEILKFNLENEGYEVDTANSAEEALKM--DISSYHLILLDVMMGEISGFK 63
           ILVV+DE  + E++  NL++ G+    A +AE+AL +  D+    L+LLD M+   SG  
Sbjct: 5   ILVVEDEPAIAELIAVNLQHAGHYPIRAYNAEQALSLMSDVLP-DLVLLDWMLPGKSGAT 63

Query: 64  MANMLKKDKKTARVPIIFITAKDTENDTVTGFNLGADDYISKPFSLREVIARVKAVLRRT 123
            A  L+ + +T ++PII +TA+  E D V G   GADDY++KPFS +E++AR+KAVLRR 
Sbjct: 64  FAKELRNNDRTKQIPIIMLTARSEEQDKVLGLEAGADDYVTKPFSPKELLARIKAVLRRR 123

Query: 124 ATMETEKAPERLTYQSLVIDITKKKVSIDDE----EVQLTKKEFEILLLLVQNKGRVFSR 179
           A   T+   + +    L +D    +V+  DE    ++ L   EF +L  L+ +  RV SR
Sbjct: 124 APQLTD---DVVAINGLRLDPATHRVTGQDESGLIKLDLGPTEFRLLHFLMTHPERVHSR 180

Query: 180 EDILARIWSDEVYVLDRTIDVNITRLRKKI--GEYGKCIVTRLGYGY 224
             +L ++W D V+V +RT+DV+I RLR  +  G Y   I T  G GY
Sbjct: 181 SQLLDQVWGDHVFVEERTVDVHIKRLRAALTPGGYSNMIETVRGSGY 227