Pairwise Alignments

Query, 416 a.a., putative two-component system sensor histidine kinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 357 a.a., signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  111 bits (277), Expect = 4e-29
 Identities = 86/253 (33%), Positives = 132/253 (52%), Gaps = 29/253 (11%)

Query: 185 ITLLSIQDIDDRLNEN-ESESWSK----LSHVLTHEIMNTIAPIISLSQTLASYPEISEK 239
           + LL  ++I  RL  + +S+S +K    ++ +L HEI N +A I   +Q L     +S +
Sbjct: 104 LLLLEPREIAGRLGRSMQSQSAAKSAIGMAEMLAHEIKNPLAGITGAAQLLGM--NLSNE 161

Query: 240 GIRGLHIIQAQSERLMEFTESFRHLSYLPQPEKRLFSLSDLLHNLEELLQTNFQENNISF 299
                 +I A+S R+++  E       L  P+ R  ++ D+L          F  +    
Sbjct: 162 DRELTDLIVAESHRIVKLLEQVEQFGNLRPPDLRPVNIHDVLERARRSAVVGFGAH---V 218

Query: 300 TLRCSPEPMM--TEGDEKQLSQVFLNLLKNAMQALEGHPHG--------ELSLQAEQDEY 349
           T+R   +P +  T  D  QL QVFLNLLKNA +A +  P G        ELSL+  + + 
Sbjct: 219 TIREDYDPSLPNTYADGDQLLQVFLNLLKNAAEACK--PGGTIRIRTFYELSLRLRRKDG 276

Query: 350 ------IVIDITDNGPGIPPEIMDKVFIPFFTTKSEGTGIGLSLCKEIIRRHEGHLAIKE 403
                 + I+I D+GPG+PPEI   VF PF + +  GTG+GL+L  +II  H+G +A+ +
Sbjct: 277 SGGTVPLQIEIMDDGPGLPPEIESDVFEPFVSGRENGTGLGLALVSKIISDHDGWIAV-D 335

Query: 404 SRAGKTVFHIELP 416
           S  G+TVF I LP
Sbjct: 336 SVPGRTVFRISLP 348