Pairwise Alignments

Query, 238 a.a., ABC transporter ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 225 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  179 bits (454), Expect = 4e-50
 Identities = 96/219 (43%), Positives = 140/219 (63%), Gaps = 3/219 (1%)

Query: 1   MIKTEKLSMLFTTEEVQTKALNEVTLHVEQGEFVAIMGPSGCGKSTLLNILGTLDSPTSG 60
           +I  + LS L +T +     L +V L ++ GE VAI+G SG GKSTL+ +L  LD+P+ G
Sbjct: 5   IISAQSLSKLVSTNQEHLTILKQVNLSIQAGESVAIVGASGAGKSTLMTLLAGLDTPSEG 64

Query: 61  SYFFEGKQVDKMNENQLTALRKNNLGFIFQSFNLIDELTVYENVELPLVYMGIKTAQRKE 120
             +  GK + ++++    ALR  ++GF+FQSF LI  L+  ENV LP +  G   A+ +E
Sbjct: 65  EVYLLGKPLSQLDDEARAALRSESVGFVFQSFLLIPSLSALENVTLPCLLKG--EAEDRE 122

Query: 121 KVNKVLEKVNLLHRANHYPQQLSGGQQQRVAIARAVVTDCKLLLADEPTGNLDSVNGVEV 180
           +  K+L+ V L HR +H P QLSGG+QQRVAIARA +   ++L ADEPTGNLD     +V
Sbjct: 123 RAQKLLKAVGLEHRMHHSPAQLSGGEQQRVAIARAFMISPQVLFADEPTGNLDQETAAKV 182

Query: 181 MELLSELNRQ-GTTIIIVTHSQRDATYAHRIIRLLDGQI 218
           ++LL ELNR+ GTT+++VTH  + A    R   +  G++
Sbjct: 183 IDLLFELNREHGTTLVLVTHDPKLAQRCQRRFFMQAGEL 221