Pairwise Alignments

Query, 238 a.a., ABC transporter ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 248 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Dechlorosoma suillum PS

 Score =  209 bits (532), Expect = 4e-59
 Identities = 106/221 (47%), Positives = 145/221 (65%)

Query: 1   MIKTEKLSMLFTTEEVQTKALNEVTLHVEQGEFVAIMGPSGCGKSTLLNILGTLDSPTSG 60
           +I+   L   + T       L  V+L +  GEFVAIMGPSG GKST +NILG LD P+ G
Sbjct: 13  VIEVAGLDKAYDTPMGPFPVLKGVSLAIHAGEFVAIMGPSGSGKSTFMNILGCLDRPSGG 72

Query: 61  SYFFEGKQVDKMNENQLTALRKNNLGFIFQSFNLIDELTVYENVELPLVYMGIKTAQRKE 120
            Y  +GK V  ++++Q   LR   +GF+FQ FNL+  +++ +NV LPLVY G+   +R++
Sbjct: 73  DYILDGKHVSALDKDQTALLRNRTIGFVFQGFNLLPRMSLEDNVALPLVYCGVDKEERRQ 132

Query: 121 KVNKVLEKVNLLHRANHYPQQLSGGQQQRVAIARAVVTDCKLLLADEPTGNLDSVNGVEV 180
           +  ++L KV L   A   P ++SGGQQQRVAIARA+V   +L+LADEPTGNLDS    E+
Sbjct: 133 RARELLAKVGLGQYAKSLPNRISGGQQQRVAIARALVNRPRLILADEPTGNLDSHTSEEI 192

Query: 181 MELLSELNRQGTTIIIVTHSQRDATYAHRIIRLLDGQIVSE 221
           M L  ELNR+G TI++VTH    A +A R +R LDG+IV +
Sbjct: 193 MALFEELNREGITIVLVTHEPDIAQHAKRQVRFLDGRIVHD 233