Pairwise Alignments

Query, 368 a.a., putative two-component system sensor histidine kinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 565 a.a., signal transduction histidine kinase LytS from Klebsiella michiganensis M5al

 Score = 84.3 bits (207), Expect = 7e-21
 Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 10/193 (5%)

Query: 172 RIDQLESTTLQSELKFLKSQINPHFLFNMLNNANVLIKRNPEEASKVLFKLEDLLRYQIN 231
           R +QL     ++EL+ L+S+INPHFLFN LN  +  I+ NP+ A +++F L   LRY I 
Sbjct: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRMNPDTARQLIFNLSRYLRYNIE 407

Query: 232 DSSRERVALASDIRFLNDYLNLEKIRRDHFQFTMEQEGDIGSIWIQPLLFIPFVENAVKH 291
               E++ +  ++  + DY+ +E+ R       +    D  S  I  LL  P VENA+ H
Sbjct: 408 LKDDEQIDIKRELYQIKDYIAIEQARFGDKLTVIYDIDDEVSFMIPSLLIQPLVENAIVH 467

Query: 292 SFD-SEHPSYVHLSFKVEENRLEFRCENT----MPAVAV---SNKVGG--IGLANIQRRL 341
                +    V +      NR+     +T     PAV     ++++ G  IGL N+  R+
Sbjct: 468 GIQPCKGKGVVTIGINECGNRVRISVRDTGNGIDPAVVARVEADEMPGNKIGLLNVHHRV 527

Query: 342 GLLYPDRYELEQI 354
            LLY +   + ++
Sbjct: 528 KLLYGEGLHIRRL 540